Coregonus clupeaformis (lake whitefish): 121547271
Help
Entry
121547271 CDS
T08357
Name
(RefSeq) vacuolar-sorting protein SNF8-like isoform X1
KO
K12188
ESCRT-II complex subunit VPS22
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121547271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121547271
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121547271
Membrane trafficking [BR:
cclu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
121547271
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121547271
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
CDK5RAP3
Activator-TraM
DUF4896
Motif
Other DBs
NCBI-GeneID:
121547271
NCBI-ProteinID:
XP_041714378
LinkDB
All DBs
Position
31
Genome browser
AA seq
258 aa
AA seq
DB search
MHRRGVGAGAIAKKKLAEAKYKERGTVLAEDQIVQMSKQLETFKSNLEEFASKHKQEIRK
SSQFRVQFQEMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLIT
LDELHHRVLKGRGKFAQDVSQDDLVRAIKKLKAMGNGFGMIPVGSSYLVQSVPAELNMDH
TVVLQLAEKKGYVSVSEIRESLKWERERACHVLEDLLKEGLAWLDSQASGEPQYWLPALF
SELTSRDVTPEEANQMTP
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcataggagaggagtaggtgcaggagctatcgccaaaaagaagcttgcagaggccaag
tataaagagagggggacagttctagctgaggatcaaattgttcagatgtcaaaacagctg
gagaccttcaaatctaaccttgaggaatttgccagcaagcacaaacaagagattcgtaag
agttcccagttccgggtccagtttcaggagatgtgtgccaccattggagtcgacccactt
gcctctggcaaaggcttttggtcggagatgcttggtgtgggtgacttctattacgagctg
ggtgtgcagatcattgaagtatgcctggccctgaaacacagaaatggaggacttattacc
ctggatgagctccatcatagagtgttgaagggaagggggaaatttgctcaggatgtgagc
caagatgacttggtgcgggccataaagaagctgaaagccatggggaacggctttgggatg
attcctgttggaagctcttaccttgtgcagtcagtgccagcagagctcaacatggaccac
actgtggtacttcagctggctgagaagaagggctacgtttcagtgagtgagatcagagag
tctctcaagtgggagcgagagcgggcctgtcatgtgctggaagacctgttgaaagagggc
ttggcgtggttggattcccaagcttccggagagccacagtattggctgccagccctcttc
tctgagctgacttcccgtgatgtcacacctgaggaggccaatcagatgacgccttaa
DBGET
integrated database retrieval system
