Coregonus clupeaformis (lake whitefish): 121547306
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Entry
121547306 CDS
T08357
Name
(RefSeq) myoferlin isoform X1
KO
K22125
myoferlin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121547306
Membrane trafficking [BR:
cclu04131
]
Endosome - Lysosome transport
Others
Ferlins
121547306
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerI
FerA
PI3K_C2
Pex24p
Motif
Other DBs
NCBI-GeneID:
121547306
NCBI-ProteinID:
XP_041714434
LinkDB
All DBs
Position
31:complement(26001963..26027254)
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AA seq
2057 aa
AA seq
DB search
MLRVVVESAKGIPKTKLGSTPDPVTSIIFKDEKKKTKSVDSEVNPVWNEVLEFDLKGSAL
DSSSYIDVIVKDYETIGKDKFLGSAKISLKDLATGQVKSSPYKDVALVNEKGQAIGATVS
LLIRYDPPANAAPKPNDPQEGDTAGDSVEGGGEEKDEDFIDGGQSGCAGGVPSPGQPGNS
NQRLVRSTRKRNRPLANKPQDFQIRVRIIEARQLPGNNIKPVVKVNVCGQTHRTRIKRGN
NPFFDEMFFYNVNMLPLDLFDQYISIRVYDSFCLRADSLMGEFKVDVGFIYDGPAHTIMR
KWLLLNDPDDCSSGARGYLKVSMFIVGTGDEPPVEKRDVTDDQDDIESNLLMPAGVTLRL
VTLSLKVFRAEDIPQMDDTFAQSVKNMFGGDGNRKNLVDPFVEARFAGKKLCTQVIEKNA
NPEWNQMLNLQVKFPSMCEQIKLTIFDWDRLTRNDSIGTTYLNLAKIASSGGEIEDEHAG
YGFSPSLEGKTGESEVGFLPAFGPCYVNLYGSPREFTGLPDPYEELNYGKGEGVAYRGRI
LVELSTKLEGKADKTVDVIPSDDILVAQKYQRRRKYCLCAVFHSASMLQEPGEPIQFEVS
IGNYGNKLDTTCKPLASTTQYSCAVFDGNHYYYLPWADTKPVVVITSFWEDISHRLDAVN
IILYISERLQSNITAMKTAILAKASDNRLAEIWLRLVSQVIDDLDSFKVPDLEGQSNLTA
LDIQIKKLRDSALQTIMEGAKRMRDEATEIKDTLGDIEGWLDKLKQLAEEPQNSMPDVII
WMLRGEKRVAYSRIPAHQLLYSTYSEQACGQFCGRTRTILMQYPMDKNKGLKVPVQIRVN
MWLGLSAHEKKFNTFSEGTFSVFAELYENQACMLGKWGTTGLGLRYKYSDMTGKLKLKRE
YFMPPRGWEWEGEWFIDPEKGLLTEADAGHTEFMDEVFQNETRFPGGEWKPAAEPYTDVN
GEKTQNPGEIECPAGWSWEAEWTVDDNRAVDEKGWEYGITIPPDDKPKSWVPAEKMYHVH
RRRRVIRPRKRTSAAGTTTEKRDQGDPEGWEFSSLIGWKFHRKERSADTIRRRRWRRKMA
PADRLGASAIFKLEGALGVDTDEKRKDDKVDASKLFVANTPTVSCSFDRSHVYHLRIYVY
QARNLVAMDKGSFSDPYAQVSFLHMSKTTETMKATLNPTWDQTLIFHDMEIYGDPQNIGH
YPPDVVLEFYDNDQVGKHELLGRSVCVPLVKLNPGMDQTPKLLWSPITHKGEQAGEVLVA
AELILKDKGIGTDLPLVPPKRAENLYMVPQGIRPVVQLMAIEILAWGLRNMKTYQLATVS
SPSLVVECGGEMVQSAVIKNMKKSPNFPGSVLFLKVLLPKEEMYTPPIVLKVIDHRPFGR
KPVVGQCTIDTLEEFRCDPYIIQKSSMSSKVALMAASPRDIRIDMEDRRPLLEAQHAEKE
KETVDWWSKFYASIGDQEKCRPYLEKGYDTLKVYDNELEDIPEFKQLTDFCSTFKLQRGK
NEDGDDDDPSVVGEFKGSFKVYPLSDDPGVALPPRQFRELPESGPQECLVRIYVVRGIDL
QPKDNNGQCDPYIKIALGKKSIEDRDNYLPNTTNPVFGRMFEMTCFLPQDKDLKISVYDY
DLLSRDEKVGETVIDLENRFLSRFGSYCGLPQTYCISGINQWRDQLKPSQILQNLARLKG
VPPPRTEDNGNTLSFNGKQYTLAQFEANNKIHQHLGPANERLPLHVLRTQGLVPEHVETR
TLFSSFQPQLSQGRLQMWVDVFPKSMGLPGPPFDIAPRKAKKYFLRAVVWNTADVILDET
SITGEHMSDVYVKGWMPGMEEDKQKTDVHYRSLDGDGSFNWRFIFGFEYLPAEQLCLVSK
KEHFWSLDKTEFRIPPKLIVQIWDNDKFSLDDYLGTVELDLRNLNAPAKTPEKCSLGMME
VMLDAGPHKSDGAKSLFAQQSVRGWWPCVTEQDGTKVLGGKVEMTLEIVAEKEVDEKPAG
KGRDEPNMNPKLDFPNRPDTSFFWFTNPCKTMKFIVWHRFKWMFIGLILLILVLLFIGIL
LYSLPNYISMKIVKPFN
NT seq
6174 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgggttgtggtagaatctgctaaaggtataccaaaaactaaacttggaagtact
ccggatcccgtaacatctattatttttaaagatgaaaagaagaaaaccaaatcagttgac
agtgaagtaaacccagtttggaatgaagtccttgagtttgatttgaagggctctgcgctt
gattcctcatcttacattgatgtgattgtgaaagactacgaaactattgggaaagataag
tttctaggctctgcaaaaatctcactgaaagaccttgcaactggtcaagtcaaatcctct
ccatataaagatgtggctcttgtcaatgaaaaggggcaggctattggggccacggtgagc
cttttgattcgctatgaccctccagccaatgccgctccaaagccaaatgacccacaggaa
ggagatacagcaggggattctgtagaaggtggaggtgaagagaaggatgaggactttatt
gatggaggacagagtggctgtgcagggggagtcccctcccctggtcagcctgggaactct
aaccaaagactggtcaggagtaccaggaaacggaaccgtcccctggccaataaaccccag
gactttcagatccgtgtcaggatcatagaggcgcgacagctccctgggaataacatcaaa
cctgttgtgaaggtgaatgtttgtggacagactcacagaacaaggataaagaggggaaac
aatcccttctttgatgagatgttcttttacaatgtcaacatgttaccattagacctattt
gatcaatatatcagcattcgggtatacgactccttctgtctgagagctgacagtctcatg
ggggagttcaaggttgatgtcggctttatctatgatggaccagctcacaccataatgagg
aagtggctccttctgaatgaccctgatgactgcagctcgggggccaggggatacctcaaa
gtcagcatgttcatagttgggacgggagacgaaccaccggtagagaagagggacgttacc
gatgaccaggatgacatagagagtaacctgctgatgccagcaggggtcactctgcgattg
gtcaccctgtcgctcaaagtgttccgggccgaggacattccccagatggatgataccttt
gcccagtcagtgaagaatatgtttggaggggatgggaacaggaagaatctagtggatcct
tttgtagaggctcgtttcgctggcaaaaagctgtgcacccaagtcattgagaagaatgcc
aacccagaatggaaccaaatgctgaatcttcaggtcaagttcccttcaatgtgtgaacaa
atcaaactgaccatctttgattgggatcgcttgactcggaatgactcaattggcaccacg
tacttgaatctggccaaaatagcatcctctggtggcgaaattgaagacgaacatgcggga
tatgggttctctccatcacttgaagggaagactggggagtctgaggtgggtttccttcca
gcctttgggccttgctatgtcaacctgtatgggagtcccagagagttcactgggcttcct
gacccttacgaagagctcaactatggcaagggtgaaggggtggcctatcgaggaagaatc
ctggttgagctctcaactaaactggaaggcaaagctgacaagactgtggatgtgatccct
agtgatgacatcttggtggcccagaaataccagcgtaggaggaagtactgtctgtgtgcc
gtgttccacagtgccagcatgctccaggagcctggcgaaccaatccagtttgaggtcagc
atcggcaactatggcaacaaactggacaccacctgtaaaccgctggcctccactacccag
tacagctgtgctgtgttcgatggtaaccactactattacctgccctgggctgacaccaag
ccagtggttgtcatcacatcattctgggaggacatcagtcaccgtttggatgcagtcaac
atcattctgtacatatctgaacgcctgcaatctaacatcactgcaatgaagacggccatc
ttggctaaagcctctgacaaccgtctggcagagatctggctgaggctggtcagtcaggtg
atcgatgatctcgacagtttcaaagttccagacctggagggccaatccaacctgactgcc
ctggacatccagatcaagaagttgcgtgacagcgccctgcagaccatcatggagggggcc
aagcgcatgagagacgaggccactgagatcaaagacaccctgggggacatcgagggctgg
ctggacaaactgaagcagctcgctgaggagccccagaacagcatgcctgacgtgatcatc
tggatgctgaggggggagaagagagtggcgtacagccgcatcccagcccaccagctcctc
tactccacctacagcgaacaggcctgtggacagttctgcggcaggaccaggactatcctc
atgcagtacccaatggataaaaacaagggtctgaaggttccagtccagatcagagtcaac
atgtggctgggcctgtctgcacacgagaagaagttcaacactttctctgaggggacattc
agtgtgtttgctgaattgtatgagaatcaggcctgcatgctgggaaagtggggaactacg
ggtctgggtttacgctacaagtattctgacatgactggcaaactgaagctgaaacgggag
tacttcatgcccccgcgaggctgggagtgggagggagaatggttcattgacccagagaag
ggtctgttgacagaggcagatgcgggacacactgagttcatggatgaagtcttccagaac
gagactcgcttccctgggggagagtggaagcctgctgccgagccctacactgacgtgaat
ggggagaagacccagaacccaggggagatagagtgtcctgcaggctggagctgggaggct
gagtggaccgtggatgacaacagggctgtggacgagaaaggctgggagtatggaatcacc
atccctccagatgacaaacccaagtcttgggtgccagcagagaagatgtaccacgtccac
cgacggaggagagtgatcaggcccaggaagagaacatcagctgctggtacaaccactgag
aagcgagaccaaggagacccggagggctgggagttctcctctctgattggctggaagttc
cacaggaaggagcgttccgccgacacaatccgacgcagacgctggaggaggaagatggcc
cccgccgaccgcctaggggcatccgctatattcaaactggagggggcgctgggggttgat
acagatgagaaaaggaaagatgataaggttgatgcatccaagctctttgttgccaatact
cccactgtttcctgttcatttgacaggtcacacgtctaccacctccgcatctatgtttac
caggccaggaaccttgttgccatggacaaaggcagcttctcggatccgtatgcccaggtg
tccttcctgcacatgagtaaaaccacagagaccatgaaggctactctgaaccccacgtgg
gaccagaccctgatcttccatgacatggagatctacggggacccccagaacattggccac
tatccccctgatgtggtgctggagttctatgacaatgaccaagtggggaaacatgagctg
ctgggtcggagcgtgtgtgtccccctggtgaaactgaacccaggcatggaccagactcca
aaattgctgtggtcccccatcacacacaagggtgaacaggctggggaggtgctggtggct
gctgagctcatcctgaaggataagggtatcgggacggacctccctctggtccctcccaag
agggcggagaatctgtacatggtgcctcaggggatacggcctgtggtgcaactcatggcc
attgagattctggcctgggggttgcgcaacatgaagacctaccagttggccactgtgtcc
tcccctagcctggtggtggagtgtggaggagagatggttcagtctgctgtcatcaagaac
atgaagaagagccccaactttcctggatccgtcctcttcctcaaagtgctccttcccaaa
gaggagatgtacacccctcccatcgtgctgaaggtgatcgaccacaggccatttggcagg
aagccagtggttggacagtgtaccatagacactctggaggagttccgctgtgacccctac
atcatccaaaagtcatccatgtcatccaaagtggctctgatggctgcttctcctcgggac
atcagaattgacatggaagacaggaggcctctacttgaagctcagcatgcagagaaggag
aaggagacagttgattggtggagtaaattctacgcttccattggagatcaggagaagtgc
cgtccttaccttgagaaaggatatgacactttgaaggtatatgataacgaactggaagat
attcctgaattcaaacaactcaccgatttctgcagcaccttcaaactgcaaagaggcaag
aatgaagatggggatgatgatgatccatctgttgttggagaattcaagggctcttttaag
gtgtaccctctatcagacgacccgggtgttgctcttcctcctcgccagttccgtgagctg
cctgaaagcgggcctcaggagtgcctggtcaggatctatgtggtcagaggcatcgacctg
cagcccaaggataacaatggccagtgtgatccttatataaagattgccctggggaagaag
tcaattgaggaccgagataactacttaccaaataccaccaaccctgtgtttggaagaatg
tttgagatgacatgtttcctgcctcaagacaaagacctgaagatctctgtgtatgactat
gatctgctgagtcgcgatgagaaagtgggagagactgtgattgacctggagaaccgtttc
ttgtcacgcttcggctcctactgtggcctacctcagacatactgcatctctggaatcaac
caatggcgcgaccagctgaagccctctcagatccttcagaacctggcccgcctcaaaggc
gtccctccacccaggacagaagacaacggcaacacactgtcattcaatgggaaacagtac
accctggctcaatttgaggccaacaacaagatccaccagcacttgggccctgccaacgaa
cggctccctctgcatgtgctcagaactcagggactggtgccggagcatgtggagaccagg
acactgttcagcagcttccagccccaactctctcagggacgccttcaaatgtgggtggat
gttttccccaaaagcatgggccttcccggaccaccctttgacattgcaccacgcaaggcc
aaaaagtatttccttcgagctgttgtttggaacaccgctgatgtcattctggatgaaacc
agcatcactggggagcacatgagtgatgtctatgtcaaaggctggatgccaggtatggag
gaggacaagcagaagactgatgtccactacaggtctctggatggagatggcagcttcaac
tggaggttcatcttcggctttgaatacctgcccgctgaacagctatgtctggtctccaag
aaggagcacttctggagtctagacaaaacagagttcaggataccccccaagttgattgtt
caaatttgggataatgacaagttctcattggatgattacctgggcacagtagagttggat
ctgcgtaacctaaacgctccggccaagactccagagaagtgcagtctgggtatgatggag
gtgatgttggatgcagggccacacaaatcagacggggccaaatcgctgttcgctcagcag
tctgtcagaggctggtggccctgtgtcactgaacaggatgggacgaaagtccttggtggg
aaggtcgagatgactcttgaaattgtggctgagaaagaggtggatgagaagcctgctggg
aagggcagggatgaacccaacatgaacccaaagcttgacttccctaaccgtccggacaca
tccttcttctggttcacgaacccctgtaagaccatgaagttcattgtgtggcacagattc
aagtggatgttcattggactaatcctactgattctagtgctgctcttcatcggaatcctg
ttgtactctttaccgaactacatttcaatgaaaattgtgaagccattcaattga
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integrated database retrieval system
