Coregonus clupeaformis (lake whitefish): 121547344
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Entry
121547344 CDS
T08357
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 11B
KO
K03036
26S proteasome regulatory subunit N6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
121547344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cclu03051
]
121547344
Proteasome [BR:
cclu03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
121547344
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN6_N
PCI
RPN6_C_helix
Csm6_6H
TPR_ESP1
DDRGK
SbsC_C
TPR_12
Motif
Other DBs
NCBI-GeneID:
121547344
NCBI-ProteinID:
XP_041714537
LinkDB
All DBs
Position
1:22636028..22644445
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AA seq
422 aa
AA seq
DB search
MAAAAVVEFQRAQSLISTDRNASIDILHSIVRRNIQDSDEESVRVKEQSILELGSLLAKT
GQAAELGGLLKFVRPFLISISKAKAARLVRSLLDLFLDMEAATGQEVDLCLECIEWAKVE
KRTFLRQALEARLISLYFDTKRYQEALALGTQLLHELKKMDDKALLVEVQLQESKTYHAL
SNLPKARAALTSARTTANGIYCPPKLQAALDMMSGIVHAASEKDWKTAYSYFFEAFEGYD
SIDHPKAITGLKYMLLCKIMLSLPEEVQSLISGKLALRHVGRQTDALKCVAQASKNRSLA
DFEKALTEYTAELRNDPIIRTHLATLYDNLLEGNLIRVIEPFSRVQIEHISGLIKLSKAD
VERKLSQMILDKKFHGILDQGEGVLIIFDEPPVDKTYGAALETIQNMSKVVDSLYNKAKK
LT
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcggcagtggttgagtttcagagagctcagtctcttattagcacagatcgt
aacgcctctattgatattctacattctattgtgaggagaaatatccaggacagtgatgaa
gaatccgttcgagttaaggaacagagcatcctggagctggggtcactcctggccaaaaca
ggacaggctgcagagttggggggtctgctgaagtttgtgcggccgttcctcatctccatc
agtaaggccaaggcggcccggctggtccgctccctgctggacctcttcctggacatggag
gcagccacaggccaggaggtggatctgtgtctggaatgcatcgaatgggccaaggtggag
aagaggaccttcctcaggcaggctctggaggcccgtctgatttcactctattttgacacc
aaaagataccaggaggccttagcacttggcacccagctgctccatgagctgaagaagatg
gacgacaaggcgctgctggtggaggtgcagctgcaggagagcaagacgtaccacgcgctt
agcaacctgcccaaggcccgcgccgccctcacctccgcccgcaccacggccaacggaatc
tactgtccccccaagctgcaggccgccctggacatgatgtcagggatcgtccacgcggct
tcggagaaggactggaagactgcctactcctacttctttgaggccttcgagggctacgac
tccatcgaccaccctaaagccatcaccggtctcaaatacatgctgctctgcaagatcatg
ctcagcctaccagaagaggtgcagtccctgatcagcggaaaactggccctgcggcatgtg
ggccgacagacggatgcactgaaatgcgtcgcacaagccagcaagaacagatcattagct
gactttgaaaaggcccttacagaatacacagcagagttgaggaatgaccccatcatcaga
acccacctggccacgctgtatgataacctgctggaagggaaccttatccgtgtcatcgaa
cccttctccagagtacagattgaacacatatcaggtctcatcaaactttcaaaggcggat
gtcgagaggaaattgtcacagatgatcctggacaagaagtttcatgggatcctggaccaa
ggcgagggtgtcttgatcatatttgacgagccacctgttgacaagacttatggagcggcc
ctggaaactattcagaacatgagcaaagttgtggactcgctttacaacaaagcgaagaag
ctaacatag
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