Coregonus clupeaformis (lake whitefish): 121547358 Help Entry 121547358         CDS       T08357                                  Symbol msh2 Name (RefSeq) DNA mismatch repair protein Msh2   KO K08735   DNA mismatch repair protein MSH2 Organism cclu  Coregonus clupeaformis (lake whitefish) Pathway cclu03430   Mismatch repair Brite KEGG Orthology (KO) [BR:cclu00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     121547358 (msh2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:cclu03400]     121547358 (msh2) DNA repair and recombination proteins [BR:cclu03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      121547358 (msh2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_IV MutS_II MutS_I AAA_27 Motif Other DBs NCBI-GeneID:  121547358 NCBI-ProteinID:  XP_041714541 LinkDB All DBs Position 31:complement(27904775..27933350) Genome browser AA seq 928 aa AA seqDB search MAVQPKQSLSMDAAAEHGFLSYYFSMPEKPDTTFRVFDRGDYYTVHGTDALFAAKEVFKT NGVIKTLGSGSRKLESVVLSKANFEALVRDLLLVKQYRVEVYRNHSKTKDHSWQLEYKAS PGNLTQFEEVLFGGAEGRGAGSAGVVAVRLAVGGDGQRVVGVGYVDASLRTMGVCEFLDG ETFCNLEALLVQLSPKECLLPQGDNTDNIRQVVQRGGVLLSDRKRTEFSSKDMTQDLNRL LRTRKGEANACNVLPELDKQVAMSCLAAVVRYLELLSDQSNFSSFSLTTLDLSQYMRLDN AAVQALNLFQGSPDDTSGAHSLAGLLNKCRTPQGQRLVNQWIKQPLMDKNRIEERLDLVE CLVNDGEARQTLQDDLLRRFPDLHRLSKKFHRLSATLQDCYRGYQAVGQIPALLMALEKH QGSHQMLLEAVFISPLRDLQADFIKYQEMIETTLDMNQVEHHEFLVKASFDPVLSELREK MDTLENSMQSVLTSAARKLGLDAGKTVKLECNSVLGYYLRVTCKEEKSLRNNKDFTTLDV QKNGVRFTNSKLSSLNEDYTRSREEYEEAQNAIVKEIISIASGYVDPLQSLSDVIAQLDA VVSFSVASVSAPIPYVRPRLLAADCRRLELQQARHPCLESGADTAFIPNDISFIQGEQSF YIITGPNMGGKSTFIRQVGVISLMAQIGCFVPCENAELSMIDSCLCRVGAGDSQLKGVST FMSEMLETAAILRSATKNSLIIIDELGRGTSTFDGFGLAWAISEHIASKIGCFCLFATHF HELTALATHHPTVRNLHVTALTTQHTLTMLYRVKPGVCDQSFGIHVAELACFPPAVVAMA KQKAAELEEFQEEPSVEEGPEAKKRRTDKQEGEVLIQSFLEKVKSLPAVTMTDQEVKAEL KAMKEELVARNNAYITELLARSAPIHST NT seq 2787 nt NT seq  +upstreamnt  +downstreamnt atggcggtgcaaccgaagcagagcttgtccatggacgctgctgcggaacatggtttcctc agctactacttctccatgccggagaaaccagacaccaccttcagggtcttcgaccggggt gactactacacggtgcacggtaccgacgcgctgttcgccgccaaggaggttttcaagacc aacggagtcataaagaccctgggctcaggtagccgcaagctggagagtgtggttctcagc aaggcaaactttgaggctctggtcagagacctgctgctggtgaaacaatacagagtggaa gtctacaggaaccatagcaaaaccaaggaccacagctggcaactggagtacaaggcgtct ccagggaatctgacccagtttgaggaggttctatttggcggggctgagggaagaggggct ggctcagcgggggttgtggccgtacggttggctgtcgggggtgatggacagcgtgtggtg ggcgtgggctatgtggacgcgtccctaaggaccatgggagtgtgtgagttccttgatgga gagactttctgtaacctggaggctctacttgttcaactgagccctaaagaatgtctgcta ccacagggcgacaacactgataacatacgacaggtggtgcagcgtggaggtgtgttgctg tcagacagaaagagaacagagttcagtagtaaagacatgacccaggacctcaaccgactg ctacggaccaggaaaggggaggcaaacgcctgcaacgttctgcctgaactagacaaacag gtagccatgtcatgcctggcagcagtggttcgttacctggagttgctgtctgaccaatca aacttcagttccttcagcttgacgacccttgacctgagccagtacatgaggctggacaat gctgctgtacaggccctcaacctctttcagggttcccctgatgacaccagtggagcccac tcattggctgggctactgaataagtgccgcaccccccagggccagcgattggtcaaccag tggatcaaacagccactcatggacaagaacaggattgaggagagactggacctggtagag tgtctagtgaatgacggtgaggccagacagactcttcaggatgatctgttgcggcgattc ccagatctccaccgcttgtctaaaaagtttcaccggctctcggcaacactgcaggactgt taccgtggttaccaggccgtgggccagatccctgcacttctgatggctctggagaaacac caaggaagtcaccagatgctgttggaggcagtgttcatctctcctctcagagacctgcag gctgacttcatcaagtaccaggagatgatagaaactacactggatatgaaccaggtggag caccatgagttcctggtgaaggcgtcgtttgacccggtgctctctgagctgagggagaag atggacacactggagaacagcatgcagagtgtactgaccagcgcagcacggaaactgggt cttgatgctggtaagacagtgaagttggagtgtaacagtgtgttggggtattacctgagg gtgacctgtaaagaggagaagagtctgaggaacaacaaggatttcacaacgctggacgtc cagaagaatggagtccggttcaccaacagtaagctgagttctctgaatgaagactacacc aggagcagagaggagtatgaggaggctcagaacgccatcgttaaggagatcatcagcatc gcctcgggctatgtggaccccctgcagtcgttgagtgatgtcatcgcccagctggatgcg gtggtcagcttctctgtggcctcagtctccgcccccattccctacgtcaggccacggctc ctggctgcggactgcaggcgtctggagctccaacaggccagacacccctgcctggagtcg ggcgcagacacagccttcatacctaatgatatatccttcatacagggggagcagagcttc tatatcatcacaggtcctaatatgggcgggaagtctacctttatccggcaggtgggcgtg atctctctgatggctcagattggctgctttgtcccctgtgagaatgcggagctaagcatg attgacagctgtctgtgccgtgttggggcaggggatagccagctcaagggcgtgtctacg tttatgtctgagatgctggagacagcagctattctccgttctgccacgaagaactctcta ataataatcgatgagttgggtcgaggaacatctacattcgatggctttggtctggcctgg gccatcagtgaacacatcgcctctaagattggctgcttctgtctgttcgccactcacttc cacgagcttacggcgttggccacacaccaccccaccgtccgcaacctgcacgtcaccgct ctgaccactcaacacacactcaccatgctctacagggtcaaaccaggtgtgtgtgaccag agttttgggatccatgtggcggagttggcgtgtttcccgccggcggtggttgccatggca aagcagaaggctgcagaactggaggagtttcaggaggagcctagtgtggaggaggggcca gaggccaagaaacgacgcaccgataaacaggagggagaggtattgatccagtcgtttctg gagaaagtgaaatctctgccagcagtcaccatgactgaccaggaggtgaaggcggagctt aaagccatgaaggaggagcttgttgcccgtaacaacgcttacatcaccgagctcctggca cgctccgcccctatccactcaacctga

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