Coregonus clupeaformis (lake whitefish): 121547384
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Entry
121547384 CDS
T08357
Name
(RefSeq) protein quaking-A isoform X1
KO
K14945
protein quaking
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121547384
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121547384
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Gene cluster
GFIT
Motif
Pfam:
STAR_dimer
KH-I_KHDC4-BBP
Quaking_NLS
KH_1
KH_KRR1_2nd
Motif
Other DBs
NCBI-GeneID:
121547384
NCBI-ProteinID:
XP_041714572
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All DBs
Position
31:33485949..33511992
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AA seq
348 aa
AA seq
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MVGEMSEQVRERPRPSPDYLMQLMTDRKVMSSLPNFTGIFTHLERLLEEEIGRVRKDMYN
DSMNGGVAAEGRNSEELPNGIGPVAQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEA
ETGCKIMVRGKGSMRDKKKEELNRGKPNWEHLSEELHVLITVEDTHNRAQIKLQRATAEV
KKLLVPAAEGEDSLKKMQLMELAILNGTYRDANIKQPTMAFSLASSQQHRLISSPSPVMQ
QAMRNPAPVQQPNLMPHLIRQIQSQQALMQGANQHAGLMQQSPESGGFFYTPYEYSPYTL
TPSILEYPMDTSGVLGAMTAKVQRHNMRVHPYQRVVNTDRGQLDHQTE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggtcggggagatgagtgagcaggtccgggaaagaccaaggcctagcccggactatctg
atgcagttgatgacggaccggaaggtgatgagctcgctgcccaacttcactggcattttc
acacacctggagcggctcctagaagaagagataggtagagtgcgcaaggacatgtataac
gactcgatgaatggaggtgtggccgccgagggtcggaactctgaggagctgcctaatggg
attggtccagtggctcagctgcaggagaagctctacgtgcctgtcaaagagtaccccgac
tttaactttgtaggtaggatcctgggtccaaggggtctgacagccaaacagctcgaggca
gagacaggctgtaagattatggtacgagggaaaggatccatgagagataaaaagaaggag
gagctgaacagagggaaacctaactgggaacatctgagtgaggaactccatgtactcatc
acagtggaagacacacacaacagagctcagatcaaactacaaagagctaccgcagaggtc
aagaaactactcgtaccagccgctgaaggagaggacagtctgaagaagatgcagttgatg
gagctggccattctcaatggaacctacagagacgccaacatcaagcaacccactatggct
ttctccctagcctcctctcagcagcatcggctcatctccagtccctcccctgttatgcag
caggctatgagaaaccccgcccctgttcaacagcccaacctaatgcctcacctgattcgt
cagatccagagtcagcaggccctcatgcaaggagccaatcagcatgcaggactgatgcag
caatcacctgaatcaggaggattcttctacactccctacgaatattccccctacacccta
accccatctatactagaataccccatggacactagtggagtattaggagcgatgacggct
aaggtgcaacgccacaatatgagggtccatccttaccaaagagtagtgaacaccgacaga
ggtcagttagatcaccagacagagtga
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