Coregonus clupeaformis (lake whitefish): 121547406
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Entry
121547406 CDS
T08357
Symbol
trim65
Name
(RefSeq) tripartite motif-containing protein 65 isoform X1
KO
K12031
tripartite motif-containing protein 65
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121547406 (trim65)
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121547406 (trim65)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_2
zf-C3HC4_3
zf-B_box
zf-RING_5
Prok-RING_4
zf-RING_11
U-box
IFT57
zf-Nse
Fzo_mitofusin
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
121547406
NCBI-ProteinID:
XP_041714610
LinkDB
All DBs
Position
31:complement(30646077..30676037)
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AA seq
515 aa
AA seq
DB search
METHNLSCAICLDRFKVPVTIPCGHTFCRDCITTHWDTKSKSNIGPHCPFCNEKFTTRPI
LKRNVSLSLLAEATANSAGASGRDTVPVMRGDIARAMHPILCDRHKKPLVYYCRKDNMCV
CCECAIFECKNHEQVLVESERENRELLLRKKSVEVGIRMEETERSIAELTENIAKAKVTL
QQTSHWVNAKFSMLFKVLAEKQESTENFIEQEKEASLSQVEARLEELQERAKQLRESQSQ
IATLRNLPDIQLIQESRLVEVPRMKDIQVDVTPNLQERLSAVTDILSRLSKLVSEDLEKA
LSTAVGQDKQGSPQDKRPVLAVVPSPAAPCHPAEKEGLSEYCCTLTFDPRTANGHLLLSQ
ENLRAEHLTSGPRPVPAHEARFDHTWQVLCFQGFKHGRHYWEMELSKPWAYLGVTYEGIP
RKEKGKRCMVGMNDLSWSLQLDERQLSAWHNGRRETVAGHSHHSRIGILLDYEAGTLTYY
GDGQTRLHAFHCAFTQELFPACWIGEGISITLCSP
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggagacccacaatttgtcctgtgccatttgcttggaccgcttcaaagtcccagtcacc
atcccatgcggtcacaccttctgtcgagactgcatcacaactcactgggacaccaagtcc
aagtccaacatcgggccgcattgccctttctgcaacgagaaattcaccaccagacccatc
ctaaaacgcaacgtgtccctgtcccttctggctgaggcaacagcgaacagtgctggtgca
tccggtagagacactgtaccggttatgaggggcgacattgccagagccatgcacccgatt
ctgtgtgaccgacacaagaagcccctggtgtactactgccggaaggacaacatgtgtgtg
tgctgcgagtgtgccatcttcgagtgtaagaaccatgagcaggtgctggtggagtctgag
agggagaaccgagagttactactgaggaagaagagtgtggaggtgggcatacgtatggag
gagactgagaggagcatcgctgagctgacagagaatatcgccaaagccaaggtgaccctg
cagcagacctcccactgggtgaatgccaagttctcgatgctgtttaaggtgctagcagag
aaacaggagtctacagagaacttcattgagcaggagaaggaggcttccctctcccaggtg
gaggctaggttggaggagctacaggagagggccaagcaactcagggagagccagagccag
atcgcaactcttcgcaacctgcccgacatccagctaatacaggagtctcggctggtggag
gtccctcgtatgaaggacattcaagtggatgtgaccccaaacctgcaggagaggctcagc
gcggtgacagacatcctgtcacggctctccaagctagtgtctgaggacctggagaaggct
ttgtctacagctgtggggcaggacaagcaaggttctccccaggataagcgccccgtcctg
gctgtggtccccagtcctgctgctccatgtcacccagctgagaaggagggcctcagcgaa
tattgctgcaccctgacctttgaccctcgcacggccaacggtcacctgctcctctcccag
gagaacctacgggcggaacacctgacctctgggccgcgccctgtcccagcccacgaggct
cgctttgaccacacctggcaggtgctctgcttccagggcttcaaacacggacggcactac
tgggagatggagttgtccaagccatgggcctacctgggggtgacttacgagggcatcccc
aggaaggaaaaggggaaaaggtgcatggttggaatgaacgatctgtcctggagcctccag
ctggatgagcgccagttgagcgcctggcacaacgggcgccgggagacggtggctggccac
tcccaccactcccgcatcggaattctgctggactacgaggctggaacactgacgtactat
ggagacgggcagacgcggctgcatgccttccactgtgccttcactcaggagctgttcccc
gcctgttggataggggagggcatcagcatcaccctctgctcgccatga
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