Coregonus clupeaformis (lake whitefish): 121547527
Help
Entry
121547527 CDS
T08357
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121547527
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121547527
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121547527
Peptidases and inhibitors [BR:
cclu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121547527
Ubiquitin system [BR:
cclu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121547527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
121547527
NCBI-ProteinID:
XP_041714786
LinkDB
All DBs
Position
31:10359591..10379203
Genome browser
AA seq
1242 aa
AA seq
DB search
MTIVDRASEKSDHESVGCKRSGSLTFPGGDGNGMDGGCSSWGAGGPSSSDTPRVKTGGCM
GPTPGATVYSSSAAITADRPKEQVVMTSGDGIALPQKVLFPAERLSLKWNQVHRIGSGLQ
NLGNTCFLNSALQCLTYTAPLSNYMLSREHSKTCHEPGFCMMCTMQNHITQVFANSGNVI
KPIGVLNELKRIAKHFRFGSQEDAHEFLRYTLDAMQKSCLPGSKLDRQTQATSFIHQVFG
GYLRSRVKCLNCKAVSDTFDPYLDVALEIKTAPSITKALEQFVKPEQLDGENAYKCTKCK
KMVPASKRFTIHRSSNVLTISLKRFANYNGGKIAKDVRYPECLDLRPFMSQSHGEPQVYV
LYAVLVHSGFSCHAGHYYCYVKASNGQWHQMNDSSVSVSDIRSVLNQQAYVLFYIRSPDL
KNGGDYNHMSRPPGQSSPRPILTPRVNIGPRHTNTGFIGPQLPPHMAKNTFHINGNGSLR
DYPSGSKPSTSSGVSSSSMGKTSYGLLSSSSSSSSSSSHPLSHPTGIPDTAKRQKLSFFI
GQGKQSCPSSSSSSSSFAKPSSCSSSQFTSDMPAPRAPHVNGTPSGNGNGHGASFLVPYG
QESSEESDQEGGSGLENGTAKPHVNGRKGGTVYGPVPRVLALKTNGISNSQATMHHNGSE
ANGTKGFSKLSQIGHQNGHHKVNGIKHLEKVNGSGHVMSPGLGPSISNGAESHHSGPSNE
VYSANPSQASTSQSLQSADSDSHISPTPEKRTKTHSDPLPHHAPSTAANPPSSLADVGAK
PPTDALRESSSTSNPGALPLQPNPRSLSTPVSSQPLSGPGLGAIKGLGAPHSRSGEDVRE
IENSPAAGVDGRLDGKTSSREGRDRMYSSDRNKEKDGLNSSDRDKERDRLYSSDRDRDRE
RLYSSDRDKDGERNRYHRDRSRERNWDRDSDRYRHRRDHRDREHHRSYRDRSASRDRHRD
WECERRWERNAYHPRDRDRDRCHHHHHYHRPRENRERERREHSLPHREEPHGRSRWREER
GEGKRGYYPSQEETPLSSITKPSQSPPRPDLSPARPALEKRPEPLREDSSEERRDKKHKK
SKKKKSKDKERHGENGTSSVDSSDRAADGSRYSKHKKKKRTRRHDTEDEKSGGETRSTQS
SEGHRDPNAPWVGRRANSSDKERASRKRRYQDDDGYDNSYPEKRHRSDDHEKDRSSSRNG
SPTATPHNASHHNLNGHTGNCFSRPNGNSHGCSTNGLYNELP
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacagagcttcagagaagtctgaccacgagtcagtcgggtgcaagcgc
tccggatcgctgaccttccctggtggcgacgggaacgggatggacggcggctgctccagc
tggggggcggggggcccctcgtcctccgacacccccagggtgaagacagggggctgcatg
ggccccacccctggagccactgtctacagcagcagtgctgccatcaccgcagacaggccc
aaggagcaagtggtgatgaccagtggggacggcatcgccttgccccagaaggtgctgttc
cccgctgagcggctcagcctgaagtggaaccaggtccaccgcatcggatcaggtctccag
aacctgggaaacacctgcttcctcaactcggctctgcagtgtctcacctacacagctccc
ctcagcaactacatgctgtcccgggagcactctaaaacatgtcacgaacctggattctgt
atgatgtgcaccatgcagaatcacatcacccaggtctttgccaactctgggaacgtcatc
aagcccatcggagtcctcaatgagctcaaacggattgcaaagcatttccgtttcggcagc
caagaggacgcccatgagttcctgcggtacacactggacgctatgcaaaagtcctgcctg
cctggaagcaaattggacaggcaaacgcaggcaaccagtttcatccatcaagtctttgga
gggtatctaaggtccagagtaaaatgtttaaactgcaaagcagtctctgacacgtttgac
ccttatttggatgtcgctttggaaataaagactgctcccagtatcaccaaagctctggag
cagtttgttaagcctgagcagctagatggagagaatgcctacaaatgcactaagtgtaag
aagatggttccagcctctaagagattcaccattcaccgcagctccaacgtgctcaccatc
tcactgaagcgcttcgccaactacaacgggggcaagattgctaaggacgtgaggtatcct
gagtgcctggacctgcgtccattcatgtctcagtcccacggggagcctcaggtctatgtg
ctctacgctgtcctggtgcactctggcttcagctgtcacgctggacactactattgctac
gtcaaggctagcaacggccagtggcaccagatgaatgactcctctgtgtcggtcagtgac
atcagatcagtcctcaaccagcaggcttacgtcctcttctacatcaggtcacctgatctg
aagaacggaggggactacaaccacatgagtcggccccccggacagtcttccccccgcccc
atcctcacaccccgggtcaacattgggccacgacacaccaacactggcttcatagggcca
cagctgcccccacacatggccaagaacacctttcacatcaatgggaacggctccctaagg
gactacccctctggctctaagcccagcaccagcagtggcgtcagcagcagcagcatgggc
aagactagctacggcctgctctcttcgtcgtcttcctcctcctcctcctcctctcatcct
ctcagccatcccacaggcatccctgacactgccaagcgccagaagctctccttcttcatc
ggtcagggcaaacagagctgcccctcctcatcatcctcttcctcctctttcgccaagccg
tcctcctgctcttcgtcacagtttacctcagacatgcccgcgccccgggctcctcacgtt
aacggcacgccctccggtaacggcaacggtcacggagcctcgttcctggtgccgtacggc
caggagtcatcggaggagtcggaccaggagggaggcagcggtctggagaacggcacggcc
aagcctcacgttaacgggaggaagggaggaaccgtctacggccccgtccccagagttctg
gccctcaagaccaacggcatcagtaacagccaggccaccatgcaccataatgggtccgag
gccaacgggactaaaggcttctccaaactcagccagattggacatcagaacggacaccac
aaagtcaatggcatcaaacacctggagaaggtcaacggcagcggtcatgtaatgtctcct
gggttgggtcccagcatttctaatggggcggagtctcaccacagtggcccaagcaatgag
gtgtatagcgccaaccccagccaggccagcacctctcagagcctgcagagtgcagacagc
gacagccacatctccccgacaccagagaaaaggactaaaactcactctgaccccctccct
caccacgcaccatcaaccgctgctaacccgccatcctcattggcagatgttggcgctaag
ccacctaccgatgccttgagggaatccagctccacctccaaccctggggccttacccctc
cagcccaacccccgctccctcagcaccccagtctcctcccagcctctctctggaccaggc
ctgggggccataaaaggcctaggagcaccacacagcagatctggggaggacgtcagggag
atcgagaacagcccagcagcaggggtggatggacggctggacggcaagaccagctccaga
gagggaagagaccggatgtattcttccgatcggaataaggagaaagacgggttgaactct
tctgatcgagataaggagagagaccgactatattcttcggaccgtgatagggatcgagag
cggctttactcttctgaccgggataaagacggagaaaggaataggtaccaccgtgacagg
agccgtgaacgcaactgggaccgtgactcagaccgctatcgacaccggcgggaccaccga
gaccgagaacaccaccggtcgtaccgtgatcgctcggccagccgggacagacaccgggac
tgggagtgtgagcgtcgctgggagaggaacgcctaccaccccagagaccgggacagggac
cgctgccaccaccaccaccactaccacagacccagagagaacagggagagggaaaggagg
gagcacagccttcctcacagagaggagcctcacggacgctcgaggtggagggaggagagg
ggtgaaggtaagaggggttactacccttcacaggaggagaccccactgagctccatcacc
aagcccagtcagtccccccctcgcccagacctctccccagccagaccagccctggagaaa
cgacccgagcctctgagagaggacagctctgaggagcgtcgggacaagaaacataagaag
agcaagaagaagaagtccaaggacaaagagaggcatggagagaatgggacctctagcgtg
gattcctctgacagggctgctgacggcagcaggtactccaaacacaagaagaagaaaagg
acgaggaggcacgacacggaggacgagaagtcggggggtgagacccgctctacccagagt
tccgaggggcaccgcgaccccaacgccccctgggtgggtcgcagggcgaacagcagcgac
aaggagagggcgagcaggaagcgacgttaccaggacgatgatggctatgacaacagctac
cccgagaaacgccatcgctctgatgaccacgaaaaagaccgctcctcctctcgcaatgga
tcgccaacagcaacccctcacaacgcatcacaccacaacctcaacgggcacacaggtaat
tgcttcagtcgacccaatggaaactcccacggatgttctaccaatggactgtacaatgaa
ttaccttag
DBGET
integrated database retrieval system
