Coregonus clupeaformis (lake whitefish): 121547560
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Entry
121547560 CDS
T08357
Name
(RefSeq) COP9 signalosome complex subunit 1
KO
K12175
COP9 signalosome complex subunit 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121547560
Ubiquitin system [BR:
cclu04121
]
Deubiquitinating enzyme (DUB)
UBL-specific proteases (ULPs)
COP9 signalosome (CSN) complex
121547560
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Gene cluster
GFIT
Motif
Pfam:
RPN7
PCI
CSN1_C
TPR_2
TPR_11
DUF7014
TPR_1
Motif
Other DBs
NCBI-GeneID:
121547560
NCBI-ProteinID:
XP_041714829
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All DBs
Position
31:11058771..11066703
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AA seq
488 aa
AA seq
DB search
MPLPVQVFNFQGVVEPMQIDADPQEDQQNAPDVNYVVENPTLDLEQYASSYSGLMRIERL
QFIAEHCPQLRAEALKMALSFVHRTFNVDVYEEIHRKLTEATREVQGAPDAVVEGGAVDP
PPLDTAWAESTRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALK
CYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDCQSQ
SVLTKLKCAAGLAELASRKYKQAAKCFLLASFDHCDFAELLSPSNVAVYGGMCALATFDR
QELQKNIISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEIKDNLLLDMYLAPHVR
TLYTLIRNRALIQYFSPYVSADMTKMAQAFNTTVLALEDELTQLILEGLINARIDSHSKI
LYARDVDQRSHTFEKSIHMGKEFQRRAKAMILRAAVLRNQIHVKSPPREGSQGELNSANS
QSRMSTNM
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcctttacccgtgcaagtattcaactttcagggggttgttgagcccatgcagatagat
gctgacccacaggaggaccagcagaatgcaccagatgtcaactatgtggtggaaaaccca
acgctggacctggagcagtatgcgtccagctacagtggtctgatgcgtattgagaggctg
cagttcatagcagagcactgtccccagctccgcgcagaggccctgaaaatggccctgtct
ttcgtccacaggaccttcaacgtagacgtgtatgaggaaatccaccgcaaactcacagag
gccaccagagaggtccagggggctccagatgctgtggtggagggcggggcagtggacccc
cctcctctggacacagcatgggccgagtcgaccaggaaaaaggccctgctcaaactggag
aaattggacactgacctgaagaactacaaaggcaactccatcaaagagagcatcaggagg
ggtcatgatgaccttggggaccactacttggactgcggtgacctcagcaacgcccttaag
tgctactcccgagcccgagactactgcactagcgccaagcatgtcataaacatgtgtctt
aatgtcatcaaggttagcgtctacctccagaactggtcccacgtccttagttatgtgagc
aaagctgaatccactccagagatagcagagcaaagaggggagagagattgccagagtcag
tcagtcctcaccaaattaaaatgtgctgcagggctagctgagctggcctccagaaagtac
aaacaagcagccaagtgcttcctgctggcctccttcgaccactgtgacttcgctgagctc
ctgtcccccagtaatgtagctgtgtacggagggatgtgtgccctcgccaccttcgacaga
caggagctacagaagaatataatctcaagcagctcgtttaagttattcttagagttggaa
cctcaggtccgtgacatcatctttaagttctatgagtcaaagtacgcttcctgtctcaaa
atgctggacgagatcaaggataacctgctgttagacatgtacctggccccccacgtacgg
accctctacacactgatcaggaacagagcccttatacagtacttcagcccgtacgtgtct
gcagacatgactaagatggcccaggccttcaacaccacagtgttagctctggaggacgaa
ctcacccagctcatactggagggacttatcaacgcacgcatagactcccacagcaagatc
ctgtatgcgcgggacgtggaccagcggagccacacgtttgagaagtctatccacatgggc
aaggagttccagaggcgagccaaagccatgatcctacgagctgccgtgctgcgcaaccag
atacatgtcaagtctcctcccagggagggcagccaaggtgaactcaactctgccaacagc
caatcacgaatgagcaccaacatgtga
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