KEGG   Coregonus clupeaformis (lake whitefish): 121547607
Entry
121547607         CDS       T08357                                 
Name
(RefSeq) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    121547607
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cclu03000]
    121547607
   03021 Transcription machinery [BR:cclu03021]
    121547607
Transcription factors [BR:cclu03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    121547607
Transcription machinery [BR:cclu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     121547607
  RNA polymerase III system
    TFIIIB
     121547607
  RNA polymerase I system
    SL1/TIF-1B
     121547607
SSDB
Motif
Pfam: TBP
Other DBs
NCBI-GeneID: 121547607
NCBI-ProteinID: XP_041714893
LinkDB
Position
31:14625439..14630650
AA seq 300 aa
MEQNNSLPPFQGLASPQGAMTPGMPIFSPMMPYGSGLTPQPVTNTNSLSLLEEQQRQQQQ
QQQASAQQGGVPGGLGQTPQLYHSQTVTTTTLPGNTPLYTATPLTPMTPITPATPASESS
GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM
VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ
FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRGEIYEAFENIYPILKGFRKTT
NT seq 903 nt   +upstreamnt  +downstreamnt
atggagcagaacaacagtttgcctcctttccagggtcttgcctcccctcagggggcaatg
actcctggtatgcccattttcagccccatgatgccctatggcagtggtctgactccccaa
cctgtgacgaacaccaacagcctgtctctcctggaggagcagcagcggcagcaacagcag
cagcagcaggcttcggcccagcagggtggggtgccagggggcttgggacagacaccacag
ctttatcactcccaaacggtcacgaccaccacactgccaggaaacacccccctctatacc
gctacaccgctaacccccatgacacccatcacacctgccactcctgcctcggagagctct
gggattgtcccacagttacagaacatcgtatccactgtgaacttgggctgcaaacttgac
ttgaaaacaatagcactgcgagctagaaatgctgagtacaaccccaagcgatttgctgct
gtaatcatgagaatacgagagccaagaacaactgcacttatcttcagttctggaaaaatg
gtgtgcacgggagccaaaagtgaagagcagtcccgcctggcagccaggaaatacgccaga
gtcgtgcagaagttgggcttcccagccaaatttcttgatttcaagattcagaacatggtg
ggcagctgtgacgtcaaattccccattcggttagagggacttgtactaactcaccagcag
ttcagcagttatgaacctgagttgttccctgggctaatctacagaatgatcaaacccaga
attgtcctgttgatattcgtttcaggcaaagttgtattaacaggtgcaaaggtgagagga
gaaatttatgaagcatttgaaaacatctaccccatcttgaaaggattcaggaagacaacg
taa

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