Coregonus clupeaformis (lake whitefish): 121547616
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Entry
121547616 CDS
T08357
Symbol
abcb10
Name
(RefSeq) ATP-binding cassette sub-family B member 10, mitochondrial
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121547616 (abcb10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121547616 (abcb10)
Transporters [BR:
cclu02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
121547616 (abcb10)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
AAA_21
ABC_ATPase
DUF87
AAA
AAA_29
Zeta_toxin
RsgA_GTPase
AAA_5
AAA_25
nSTAND1
AAA_33
P-loop_TraG
HMUDK_HMUD1
AAA_14
AAA_30
APS_kinase
AAA_24
Motif
Other DBs
NCBI-GeneID:
121547616
NCBI-ProteinID:
XP_041714899
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All DBs
Position
31:complement(14756456..14761876)
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AA seq
721 aa
AA seq
DB search
MGLLLLQLSKCPGVNILKRKVHSRVHILFWLECQTSRGQRKGREVSVRRFEPVAHSSLLH
LRRCNSLVPCVPLRQGTIPRHLLRSSSWTTTVNFANYSSSTDSKQATQQEVASKDLQSTE
TKQNPTRLPTEDVKRILQLAHPERLRLSAAVGFLMVSSAVTMSAPFFLGQVIDTIYTSSS
EDFSASLRSLCIMLSGVFLCGGAANAARVYLMQISGQQIVRNLRVSLFSSILRQEVGFFD
KTRTGELINRLSADTAIIGRSVTDNLSDGLRAVAQATAGVSMMFYVSPSLAAFVLMIVPP
MAGLAVIYGRYLRSISKRTQDSLAEATQLAEERISNMRTVRAFGKELTEVAKYMEKANYV
LHLAKQEAVLRAGFFGATGLSGNIIILSVLYKGGLLMASEHMTVGELSSFLMYAFWVGIS
IAGMSSFYSELMKGFGAGARLWELLDRKPEFPLNEGIVLRPEQLKGQLEFQNVSFAYPTR
KDAPIFQDLSLSVPAGSVMAVVGPSGSGKSTLVSLLLRLYDPDAGVITIDGHDVRDLNPY
WLRSHIGTVSQEPVLFSCSIAENIAYGAPDSGTVTVQEIHRAAQIANAYEFVRGFPKGFD
TVVGEKGVLLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEFLVQEALERLMDGRT
VLIIAHRLSTIQNADAVAVLDQRRVVECGQHAQLLGNRQGLFRKLMEKQAFLQEGQKQAL
R
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgggactgttgctgttgcaattgtcaaaatgtccaggcgtaaatattttgaagcgcaag
gttcactcccgtgtacatatactattttggttagaatgccagacgtccaggggacaacga
aaggggcgagaggtgagtgtgagaaggttcgaacctgtggcacactcttcgcttttacac
ctgaggagatgcaactctctcgtcccctgtgttccacttagacagggaaccatacctcgc
catttgttgaggagctcatcatggacaaccacggtaaactttgccaactacagctcctca
acagactcaaaacaagcaacacaacaagaagttgccagcaaagatctgcaatcaacggaa
acaaaacaaaacccaactcggttacccactgaggatgtcaaaaggatattacaacttgcc
caccctgagcgcttgcgactgtccgcggctgtgggcttcctgatggtctccagtgctgtc
accatgtcggcgcccttcttcctgggccaggtcattgacaccatctacaccagctcctca
gaggacttcagtgcctctctccgctctctgtgtatcatgctctcaggggtattcctttgt
gggggcgccgccaatgctgcccgtgtctacctcatgcaaatctcagggcaacagattgtg
agaaatctacgtgtatccctattctcctccattctgaggcaggaggtgggtttctttgat
aagacccgtaccggggagctcattaaccgcctatctgcggacacagcgatcatcggccgc
tccgtcacagacaacctttcagatgggctccgcgctgttgcccaggcaacagctggggtc
agcatgatgttttacgtgtcacccagtttagcagcctttgtgctgatgatcgtgcctcct
atggctggcctggctgtcatatatgggagatacctgcgctccatatccaaacgcacacag
gactctctggccgaggccacacagttggcagaagagcgtatcagcaacatgaggacagtt
cgggcatttggtaaggagctgacagaggtggccaagtatatggagaaggccaactatgtt
ctccacctggccaaacaggaagccgttttgcgggccgggttctttggcgcgactggactc
agtggcaacatcatcatcctgtcagtgctgtataagggagggctattgatggccagtgaa
cacatgactgtgggagagctctcttccttcctcatgtacgccttctgggtgggcattagc
attgcaggtatgagctcgttctactctgaactgatgaagggctttggagcaggggcacgg
ctttgggagctactggacaggaagcccgagttccccctcaatgagggtattgtgctgagg
ccggagcagctgaagggtcaactggagtttcagaatgtctcctttgcctacccaacccgc
aaagacgcccccatcttccaggacctgagtctgtccgtgcctgctggctccgtcatggcc
gtggtaggccccagcggatcgggcaaatccaccctggtctccctgctgctcaggctctac
gacccagatgcaggtgtgatcactatcgacgggcatgatgtgagagatttgaatccttat
tggctgaggagtcacattggaactgttagtcaggagcctgtgctcttctcctgttccatt
gctgagaacattgcctatggagcgccagactctggcacggtcacagttcaggaaatccac
cgggctgcacagatcgccaacgcttatgagtttgtccgaggtttcccaaaaggctttgac
actgtggtgggagagaagggtgttctactgtcaggtggtcagaaacagagaattgctatt
gcaagggctctgcttaagaaccccaagatacttctacttgatgaggctacaagtgccctg
gatgcagagaatgagttcctggtccaggaggctctagagcggctcatggatgggcgcaca
gtgctgattatcgcccaccgcctctccaccatccagaacgctgacgccgtggcggtgctg
gaccagcggcgcgtggtggagtgtggtcagcacgcacagctcctgggcaaccgccaaggc
ctcttcaggaagctgatggagaaacaagccttccttcaagaggggcaaaagcaagcattg
cgttga
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