Coregonus clupeaformis (lake whitefish): 121547666
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Entry
121547666 CDS
T08357
Symbol
lhcgr
Name
(RefSeq) lutropin-choriogonadotropic hormone receptor isoform X1
KO
K04248
lutropin-choriogonadotropic hormone receptor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04020
Calcium signaling pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121547666 (lhcgr)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121547666 (lhcgr)
04081 Hormone signaling
121547666 (lhcgr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cclu04030
]
121547666 (lhcgr)
G protein-coupled receptors [BR:
cclu04030
]
Rhodopsin family
Peptide
Lutropin-choriogonadotropic hormone
121547666 (lhcgr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
LRR_8
LRR_5
LRR_14
SPATA2_PUB-like
Motif
Other DBs
NCBI-GeneID:
121547666
NCBI-ProteinID:
XP_041714974
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Position
31:17457158..17478514
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AA seq
739 aa
AA seq
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MWISLLFLLFPSVLLFFGFGCRCTSSFVCPGICRCSFNTITCNNITEKSVPMSERGPRLV
LNHLSMNAIASHSFDGLRRVQHIEIGQSVALETIETLAFNNLLDLNEIFIKNTRSLVHIA
RRTFNNLPKLRYLSISNTGITVFPDMTSIHSLEPWNQNFVLDICDNLYLLTIPENAFVGM
TTEYTAMNLFNNGIREIQDYAFNGTKINKLVLKNNRNLRVIHREAFKGAVGPRILCRNQL
HILERHAVHTLDVSSTAIETLPSHGLDSVVELVARTAYGLKRLPPFMGLGTLEKAHLTYN
SHCCALLTWDTHRDSPINAARHNGSRPAYCDHSPSEKSPGVMVDSSDTSLLVEIPGITED
VDYESYGGVDFQYPELGLYCQTRPTLQCTPEADAFNPCEDIAGFSFLRVAIWFINILAIA
GNLTVLLIFFFSRCKLTVPRFLMCHLAFADFCIGVYLLMIAVVDLRTRGHYSEHAIDWQT
GADCSAAGFLSVFGGELSVYTLSTITLERWHTITHALQLEKRLGLAQAAGIMAGGWLICL
GMAMLPLVGVSSYSRVSMCLPMDIKTPLAQAFILLLLLFNVGAFLVVCVCYVLIYLAVRN
PQLPGRSADAKIAKRMAVLIFTDLLCMAPISFFAISAAFKVPLITVTNSKILLVLFFPIN
SCANPFLYAIFTKAFRKDVYLLLSNMGCCESKTNMYRMKAYCSENVVKSRSGNKGTLLCT
TLRMDPLPLQSQQLKDDGD
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgtggatatcgctgttgttcctgctcttcccgtctgttttgctcttctttggctttggc
tgccggtgcacttccagctttgtgtgtccggggatctgccggtgttccttcaacaccatt
acatgtaacaacatcacggagaagtccgttccaatgagcgaaaggggtccaagactggtc
ctgaaccatctctctatgaacgctatagccagccactcctttgacggtctgagaagagtc
cagcatatagaaattggtcaaagtgtcgccttggaaaccatagagacccttgcgttcaac
aaccttctggacctcaatgaaatcttcattaagaacacacggagcctggtgcacatcgct
cgaaggacgttcaacaaccttcctaagctgcgttatctgagtatatccaacactgggata
acagtgttccctgacatgacttctatccattctctggaaccttggaaccaaaattttgtc
ttggatatctgtgacaatctctatcttctgacaataccagaaaatgctttcgttggcatg
acaactgaatatactgcaatgaacctgttcaacaacggcattagagaaatacaagactat
gcctttaatgggaccaagataaataaattggttttaaagaataaccgaaacctcagagtg
atccatagggaagcttttaaaggagcggtgggccctaggatactctgcaggaatcaacta
cacatactagaaaggcatgcagtacacacactagatgtctcgtcaacggcgatagagact
ttgccgtcccatggcctagattctgttgtggagctggttgcccgtacagcctacggccta
aagagactaccccctttcatgggtctggggaccctagagaaggcacacctcacctacaac
agccactgctgtgcccttctcacctgggacacacacagggattctccaatcaatgcagca
cgacataatggatctaggcctgcgtattgcgatcacagtccgtctgaaaagtctccaggt
gttatggtggattcatccgacacatccctactggtggaaatacctggaataaccgaagat
gttgattatgagtcctacgggggtgtggatttccagtatccagaactagggttatattgt
cagaccagaccaaccctccagtgcacaccagaggctgacgcctttaacccgtgtgaagac
atagcaggtttcagttttctcagagtcgccatctggttcatcaacatcctggcgatcgcc
ggcaacctgacggtcctcctcatcttcttcttcagcagatgtaaactcaccgtgccacgc
ttcctcatgtgtcacctggcctttgctgacttctgcatcggtgtctacctcctcatgatt
gccgtagttgacctccgcacccgaggccactacagtgagcacgccatcgattggcagacg
ggggcggattgtagtgcggcgggcttcctgtctgtgttcggtggggagctgtcggtgtac
acgttgtcgactatcactctggagcgctggcatacgataactcatgccttgcagctggag
aagaggctaggcctggcgcaggctgctggcatcatggctggagggtggttgatctgtctg
gggatggccatgctccccctggtgggggtcagtagctacagcagggtgagtatgtgcctt
cccatggacatcaagactcctctggcccaggccttcatcctcctgctcctcctcttcaac
gtgggggcgttcctggtggtctgtgtctgctacgttctcatctacctggcagtacggaac
ccccagttacccggccgcagcgcagacgccaagatcgctaagcgcatggctgtcctcatc
ttcacagacctcctctgcatggcgcccatctcattcttcgctatatccgcagcctttaag
gttccgctcatcactgtcaccaactccaagatactcctggtgctgttctttcctatcaat
tcctgtgccaaccctttcctctatgccatctttactaaagctttcaggaaagatgtctat
ctgttactgagtaacatgggctgctgcgagagtaaaactaatatgtaccggatgaaggcc
tattgctctgagaatgtggtgaagagtcgttctgggaacaagggcactctgctttgtaca
acactaaggatggaccctctgccactgcagagccaacagctgaaagatgatggagattag
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