Coregonus clupeaformis (lake whitefish): 121547675 Help Entry 121547675         CDS       T08357                                  Symbol msh6 Name (RefSeq) DNA mismatch repair protein Msh6   KO K08737   DNA mismatch repair protein MSH6 Organism cclu  Coregonus clupeaformis (lake whitefish) Pathway cclu03430   Mismatch repair Brite KEGG Orthology (KO) [BR:cclu00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     121547675 (msh6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:cclu03400]     121547675 (msh6) DNA repair and recombination proteins [BR:cclu03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      121547675 (msh6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I PWWP MutS_IV MutS_II Motif Other DBs NCBI-GeneID:  121547675 NCBI-ProteinID:  XP_041714989 LinkDB All DBs Position 31:18216959..18242469 Genome browser AA seq 1381 aa AA seqDB search MAKQSSIFKFFNKSPPPVPKAKPSPAEADLPSSVRKKNNSPKEEAKHASQTPTTKKTAAK AIKGGFGKLFGNKTPTVKESPAPCPFSAGALVWAKLEGHPWWPCMVVPQPLGGQQMRGRG KSQRLHVHFFDEPPTRGWVSTKYIREYQGSDSSDAKTGGVFFSGKPVIRRAMELADAAMP DSSETRLKMPVCMDPSDAEEEEEDMELDKSALTDEDLTEEEDDETVKSKPSRRSSRTTAE QGSKSKRRRIVVASDSEDSGDEFKPEQAGGSSEEDDEEEEVVNSASEEEEDAESEHEAEP GSPVKPVKRKRPAEKPSSAKPKPKIPTLPEPAKRAPVTSTITADTKSRLSAFSAPESFDS QAIGSVAGGQGGATVWDHEKLDWLQEGRRKDTKRRRQSEEDYDPTTLYVPEDFLNKTTPG MRRWWQLKSETFDAVLFYKVGKFYELYHMDAVIGVNELGLTFMKGAWAHSGFPEIGFGRF SDGLVQKGYKVARVEQTETPDMMEARCKTMLKPTKFDRVVQREVCRIITRGTQTYSVLDG APSETQSKYLLSIKEKAEEESSGRCRTYGVSFVDTSVGYFHVGQFQDDRHCSRLRTLVSH YAPAQVLFEKGNPSAETRKIFKASLSSAMQEGLTAGSQFWDAQKTLKTLAEENYFKESVG KDEESGSSVLPSVLKSMTSESDSLGLTPKEGYELALSALGGCIFYLKKCLVDQELLSMTN FKEYVPVDVEMEKAAGPTHFFSQTRQRMVLDGVTLANLEILQNGSGGTEGTLLERLDTCS SPFGKRLLKQWLCSPLCNPTSIGERLDALEDLMGVQAQATEVSDLLKKLPDLERLLSKIH SIGTQKGQDHPDSRAVLYEEVTYSKRKIADFLSALEGFKTMQEIVSILGPVAVDFRSRLL CQVVNLKDDGQEGLFPDLSAELKRWDTAFDHQKARTTGVITPKAGFDPEFDQALSGIKTC EKDLQDYLDRQKKRLGCRNLTYWGTGRNRFQMEVPDSVSERNIPEEYKVKSTKKGWKRYW TREIERLFSELQNLEEKRDAALKDCMRRLFYNFDKNYRDWQTGVECMAVLDVLLSLTRYS QGGDGGPMTRPQVLLPGDVSQSAAFLDLRGSRHPCVTKTFFGDDFIPNDIAIGCPGGEEG QEDKGHAPCVLVTGPNMGGKSTLMRQCGLVVILAQLGCYVPAESLSFTPVDRVFTRLGAS DRIMAGESTFFVELSETASILHHGTKHSLVLLDELGRGTATYDGTAIASAVVNELAERIC CRTLFSTHYHSLVEDYTNNPAVRLGHMACMVENEGDEDPSQETITFLYKFIAGACPKSYG FNAARLANLPEDVIQSGHRKAKEFERSTISLRVFKKLCLYAEDPTAASTQFALLVRMIGN L NT seq 4146 nt NT seq  +upstreamnt  +downstreamnt atggcgaagcaaagcagcattttcaaatttttcaataagtctccgccaccggttccgaag gcgaaaccctcgcctgcagaagcggacttgccatcctcggttcgaaaaaagaacaactct ccaaaagaagaagctaagcatgcatctcaaactccgaccaccaaaaagactgctgcaaaa gcgatcaaaggcggattcggcaaactctttgggaataagaccccaacagtaaaggagagt ccagcaccatgtccattcagtgccggagccttggtgtgggccaagctagaagggcacccc tggtggccgtgtatggtagtgccccagcccctcggcgggcagcagatgaggggcaggggt aaaagccaacgcctgcatgtccacttcttcgacgagccgccgaccaggggctgggtcagc accaaatatatccgcgagtatcaaggctcggacagcagtgatgctaagacgggaggggtg ttcttcagtggtaagcctgtgatccgcagggccatggagctggctgatgctgctatgcca gacagctcagagaccagactgaagatgcctgtctgtatggacccatctgatgctgaggag gaggaggaggatatggagcttgataagtcagcactgactgacgaagacttgactgaagag gaagatgatgagacagtgaagtcaaagcctagtcgccgttcatcccgcaccacagcagaa cagggcagcaagtccaagcgtcgccgcattgtggtcgcctccgacagtgaagactcgggt gatgaattcaaaccagaacaggccggaggtagcagtgaggaagatgacgaggaagaggag gtagtgaacagtgcgtcggaggaggaggaagatgcagaaagtgaacacgaggctgaaccc ggtagcccagttaaaccggtgaaacgcaaacgacccgcagagaagccatccagtgccaaa ccaaaacccaagattcccactcttcccgaacccgccaagagagcccccgtaactagcacc atcacagccgacaccaagtctcgactctcagccttttcggccccggagagcttcgacagc caagcgattggctcagttgccggcggacaaggtggggctacggtatgggaccatgagaag cttgattggctacaggaaggccggaggaaagacaccaagagacggagacagtctgaggaa gactacgaccccacgactctctacgtcccagaagacttcctgaacaaaacgaccccaggc atgcggcgctggtggcagctcaagtcggagacgttcgacgccgtgctcttctacaaggtg ggtaagttctatgagctgtaccacatggacgctgtgatcggtgtcaacgagctgggtctg accttcatgaagggggcctgggcccactctggcttccccgagattggctttggacgcttc tcagacggactggtgcagaagggatacaaggtggcgcgagtggagcagacggagactcca gatatgatggaggctcgctgtaagaccatgctgaagcccaccaaatttgaccgggtggtg cagcgcgaggtgtgccgaatcatcacacggggaacacagacctacagcgtgttggacgga gccccttctgagacacagagcaaatacctcctgagcatcaaggagaaggcagaggaggag agttcagggcgctgcaggacctatggggtcagcttcgtagatacatctgtagggtacttc catgtgggccaattccaggacgaccgacactgctcccggctccgcaccctggtgtcacat tatgcccccgcacaggtgctcttcgagaaggggaacccttcagccgaaacccgtaaaatc ttcaaggcttctttgtcctcggctatgcaggaggggctgactgcaggctcccagttctgg gacgctcagaagaccctgaagaccctagctgaggaaaactactttaaggagagcgtgggg aaggatgaggagtctgggagcagtgttctcccctctgtcctcaaatccatgacgtctgag agcgactcgttgggtctgacccctaaggagggttatgagttggccctgtcggccctggga gggtgtattttctacctgaagaaatgtctggtagaccaggagctgctgtccatgaccaac ttcaaggaatacgtcccggtggacgtggagatggagaaggcagctgggccgacccacttc ttctcacagacccgtcagcgtatggtcctggacggggtgaccctagccaacctggagatc ctgcagaatggttcggggggtacagaggggaccctgttggaacgcctagatacctgtagt agtccatttggtaaaaggttgctgaagcaatggctctgttccccgctctgtaaccccaca tccataggggagcgcctggatgccctggaggacctgatgggagtgcaggcccaggctacg gaggtctcagacctgctcaagaagctccctgatctggagaggctcctcagtaagatccac agcatcggtactcagaagggtcaggaccacccggacagcagggctgttctgtatgaagag gtcacctacagtaagagaaagattgctgacttcctctcggctctggagggcttcaagacc atgcaggagattgtgtccatactaggaccggtcgcggtcgacttccggtccaggctactg tgccaggtggtcaacctgaaggatgatggtcaggaaggcctcttccctgacctgtcggcc gagctgaaacgctgggacacagccttcgaccaccagaaggcacgcaccaccggagtcatc acccctaaggctggctttgacccagagtttgaccaggctctcagtggcatcaagacctgt gagaaggacctacaggactaccttgacaggcagaagaagaggctgggctgcaggaacctg acctactgggggacgggacggaaccgcttccagatggaagtaccagacagcgtctcagag aggaacatacctgaggagtacaaggtgaagtccacgaagaagggctggaagcgctactgg acgagggagatagagcgtctgttctcagagctacagaatctcgaggagaagagagacgca gctctgaaggactgcatgagaagactcttctacaactttgacaagaactacagggactgg cagactggggtggagtgcatggctgtgctagatgtgttgctgagtctgacacggtacagc caggggggagacggaggaccaatgacacggcctcaagtactacttcctggtgacgtcagc caatcagcagccttcctggacctgaggggctcccgccacccctgtgtcaccaaaaccttc tttggtgatgacttcatccctaacgacatcgctattggctgccctggcggcgaggagggg caggaggataaaggacacgccccctgcgtgctggtcaccgggcctaacatgggaggaaag tctactctaatgagacagtgtggtctggtggtgatcttggcccagttgggttgctatgtt cctgctgagagcctgtccttcacacctgtggacagagtcttcacccgcttgggagcatct gaccgtatcatggctggggagagcaccttctttgtagagctgagtgagactgctagtatc ctccatcatgggaccaagcactccctggtgctgttggatgaactgggaaggggcaccgcc acatatgacggcacagcgatagccagtgctgtggtgaacgagctggcagagaggatctgc tgtcggaccctcttctctacacattaccactccctagtagaagactacaccaacaaccct gctgtacggctcggacacatggcctgtatggtggagaatgagggagatgaggaccctagt caggagaccatcaccttcctctacaagttcattgcgggagcgtgtcctaaaagctatggt ttcaacgctgctcgcctcgccaacctgcctgaggatgttatccaatccggccacaggaag gccaaggagtttgagaggagcaccatctccctacgagtcttcaagaagctgtgtttgtat gctgaagaccccacagcagccagcacacagtttgccttgctggtccggatgatcggcaac ctgtga

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