Coregonus clupeaformis (lake whitefish): 121547676
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Entry
121547676 CDS
T08357
Name
(RefSeq) F-box only protein 11 isoform X1
KO
K10297
F-box protein 11
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121547676
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121547676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta_helix
NosD
F-box-like
F-box
zf-UBR
Motif
Other DBs
NCBI-GeneID:
121547676
NCBI-ProteinID:
XP_041714990
LinkDB
All DBs
Position
31:complement(18241971..18282642)
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AA seq
880 aa
AA seq
DB search
MNSVRATSRRPRRVSRPRPVQPERNNQERDEDVPADMVAEESGPGAQNSPYQLRRKSLLP
KRTAACPAKTNMEGASTSATEDFGHRAKRARVSGKSQDLPAAPAEHYLQEKLPDEVVLKI
FSYLLEQDLCRAACVCKRFSELANDPILWKRLYMEVFEYTRPMMHPEAGKFFQINPEEYE
QPNPWKESFQQLYKGAHVKTGFAEHFYSNPARYKGRENMLYYDTIEDALGGVQEAHFDGL
IFVHSGVYTDEWIYIESPITMIGAAPGKVADKVIIENTRDSTFVFMEGSEDAYVGYMTIK
FNPDDKSAQHHNAHHCLEITVNCSPIIDHCIIRSTCTVGSAVCVSGQGACPSIRHCNISD
CENVGLYITDHAQGIYEDNEISNNALAGIWVKNHGNPIIRRNHIHHGRDVGVFTFDHGMG
YFESCNIHRNRIAGFEVKAYANPTVVRCEIHHGQTGGIYVHEKGRGQFIENKIYANNFAG
VWITSNSDPTIRGNAIFNGNQGGVYIFGDGRGLIEGNDIYGNALAGIQIRTNSCPIVRHN
KIHDGQHGGIYVHEKGQGVIEENEVYSNTLAGVWVTTGSTPVLRRNRIHSGKQVGVYFYD
NGHGVLEDNDIYNHMYSGVQIRTGSNPKIRRNKIWGGQNGGILVYNSGLGFIEDNEIFDN
AMAGVWIKTDSNPTLRRNKIHDGRDGGICIFNGGRGLLEENDIFRNAQAGVLISTNSHPI
LRKNRIFDGFAAGIEITNHATATLEGNQIFNNRFGGLFLASGVNVTMKDNKIMNNQDAIE
KAVSRGQCLYKISSYTSYPMHDFYRCHTCNTTDRNAICVNCIKKCHQGHDVEFIRHDRFF
CDCGAGTLSNPCTLAGEPTHDTDTLYDSAPPIESNTLQHN
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgaactccgtcagagcaaccagcagaagacccaggcgagtgtcgaggccgcgcccggta
cagccggaaaggaacaaccaggaaagagatgaggacgtccctgcagatatggttgcagaa
gaatccggtccaggagctcagaatagtccgtaccaacttagaagaaagtctctattaccc
aagagaacagcagcttgtccagcaaagactaacatggagggtgcttccacttcagccaca
gaagactttggccatcgggcaaaacgtgccagagtgtcaggaaagtctcaagatttacca
gcagcgccggcggagcactacctccaggagaagctgccagacgaggtggttctgaagatc
ttctcctaccttttggagcaggacctgtgtcgcgcagcatgtgtctgcaaacgcttcagc
gaactggccaatgatcccatcctctggaagaggctgtacatggaggtgtttgagtacaca
cgtcccatgatgcaccctgaggcggggaagttcttccagattaacccagaggagtacgag
cagcccaacccgtggaaagagagctttcagcagctgtataaaggagcacacgtgaagacg
ggcttcgcggaacacttctacagtaatcctgccagatacaaaggaagagagaacatgctt
tactatgacaccatagaagatgccctggggggtgtacaggaggcccactttgacggcctc
atattcgtccactctggggtctacactgacgagtggatctacatagagtcacccatcaca
atgatcggagctgcacctggtaaagtagcagacaaagtgatcattgagaacaccagagac
tccacgtttgtcttcatggagggctcggaggacgcatacgttggctacatgaccatcaag
tttaatcctgatgataagtctgcccagcaccacaacgcccaccactgcctggagattaca
gtcaactgcagccccatcattgaccactgcatcatacgcagcacttgcacagtgggctca
gcggtctgtgtgagtggccagggagcttgtcccagtatcagacactgcaacatcagcgac
tgtgagaacgtggggctttacatcaccgaccatgcacagggaatctacgaggacaacgag
atctccaacaacgcactggctggaatctgggtgaaaaaccacggcaaccccatcatcaga
cggaaccacatccaccacggcagagatgtgggcgtcttcactttcgaccacggcatgggc
tactttgagagctgcaacatccacaggaaccgcatagctggcttcgaggtgaaggcgtac
gccaaccccacggtagtgcgctgtgagatccaccatgggcagacgggagggatctacgtg
cacgagaagggccgaggacagttcatcgagaacaagatctatgcaaacaactttgctgga
gtgtggattacctccaatagtgatcctacaataaggggcaatgccatcttcaacggtaac
caaggcggagtttacatattcggtgatgggcgaggcctcatcgaggggaacgatatctac
ggtaacgccttggcagggatccagatcaggacaaacagctgccccatcgtacgacacaac
aagatccacgacggacagcacgggggcatctatgtgcatgaaaagggacagggggtgatc
gaggagaatgaggtgtacagcaacacgctggcaggagtgtgggtgaccacaggaagcaca
cctgtcctcaggaggaacaggatacacagtgggaaacaggttggcgtctacttctacgac
aacggccatggagtgttggaggacaatgatatctacaaccacatgtactccggagttcaa
atcagaactggcagcaatcccaaaatcagacggaacaagatctggggaggtcaaaatgga
ggcattctggtttacaactcaggtttgggcttcatcgaggacaatgagatctttgacaac
gctatggcaggggtgtggataaagactgacagcaaccccaccctccgaaggaataagatc
cacgacgggagagacggagggatctgtatattcaacggaggacgaggtttactggaggag
aacgatatcttcaggaacgcccaggcaggagtcctcatcagcaccaacagccatcccatc
ctgaggaagaacaggatatttgacggctttgctgcaggtattgagatcacgaatcatgcc
acggcaaccctggaaggcaatcagatcttcaataaccgctttggaggattgtttctcgca
tctggtgtcaacgttacaatgaaagataacaaaataatgaacaatcaagatgccattgaa
aaagctgtgagcagaggtcagtgcctgtacaagatttcaagttacaccagctatccaatg
cacgatttttacaggtgtcacacctgtaacacaacagaccgcaacgccatctgtgtgaac
tgcatcaagaagtgccaccaggggcacgacgtcgagttcattaggcatgatagatttttc
tgtgactgtggagccgggacgttgtcaaacccctgcacactagccggagagcccacgcac
gacacggacacactgtacgactcagcccctcctatagagtccaatacgctgcaacacaac
tga
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