Coregonus clupeaformis (lake whitefish): 121547684
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Entry
121547684 CDS
T08357
Name
(RefSeq) myomesin-2 isoform X1
KO
K24495
myomesin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121547684
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121547684
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
121547684
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Ig_2
ig
Pur_ac_phosph_N
C2-set_2
C2-set_3
Motif
Other DBs
NCBI-GeneID:
121547684
NCBI-ProteinID:
XP_041715009
LinkDB
All DBs
Position
31:complement(38111830..38148478)
Genome browser
AA seq
1434 aa
AA seq
DB search
MAATVARHKHVHVSHDYHSAQSKVVAKQYTSSEVVEDDYHHKQETRIQGVVRKKMVEKYV
REESMIRGPKFLTTLRSHTVWEQTPVKLYCTVEGYPTPLVKWYKDGVSIDRSSMKYNVQD
NVGIHTLQIAKCETDDTAQYTAVAGNIHGQVSTQASVIVKRFREEGHSSSYAWLPYKIPM
LPDIKYTKINVTFLETFGSVFGTEGDTVTLAATMTASPKLANLQPEAQWFRDDHRLSDSK
WVKIESARGETKLTLPHLNKDDEGVYSLRMVTKGGDAVHSAFVSCSDGPPPVPGAPGAPM
DIKIHDANRDYVIVSWKPPNTTTEGPIIGYFVDRCETGTENWVQCNDSPIKICKSPVPGL
FEGHSYYFRVRAINSQGISKPSRISDPIAALDPTEFERLHAVMLGGKLDVVTYHDDVEDG
KKVPGTPSKLRASETDRTYVVLSWKPAPYHGRAPVWYYIEKSLAESCAWQRVNTQVPVRS
PRYAVFDLAEGKQYLFRVLAANMYGTSEASEPTEPIQTQELRGVPSAPGQVVATRETDTS
LVIQWAEPKEPNNLIGYYIDVCVKGSKNWASANHKPHKNNKFVVQGLTTGETYVFRVQAI
NELGLSDESQESSPLSVKAALTTPSAPYDIALLACDGESMVLNWKLPVRSGGSPVTEYYI
DKHRHGEHTWREVNISPIKERLFKVEHLSAGAVYEFMVYGGSLAGLGAPSAPSKAFHCDA
WTIPEPGPAYDMTFCEIRDDSVVVEWKAPVYTGTSPITGYFVDFAKKGSDEWHCSNESHA
VSHRYHKVTGLEAGVSYVFRVRAANAEGAGKPSLASNPVVAKAVEGAQEITCTVDEESGD
IILSFESCQITESSHFVWKKFYKEITDFSKGIVIKTEGSTSKLIFKHPDQGDVGCFSVAV
TNTDGVSASHEIHAEELEKMLAKSYGIRHPVIPLKTQLAYKILERGRMRFWLQAEHISSA
VTYKFLANNNELSPTSPNHASHDVEAGIIEFVLDHFTEDSEGTFTVQIEDGKARGQSSLV
LIGADFKAALADAEHQRSEYIRVKEGPYFSEFLSVHVGDDCSVALVCKVDNLKKETALHW
FKDNVEITPEGPVSLASGARDSGSKLPISLFSKASTGIYKATISDNRGKDQSQIDISGHA
FDEIIDKLSKLAGSSAAELAIHSTATGIQLQCHMKYYTEEMKIHWLHVDSKLSHSEKVHI
GGTPAMASMEILEPTDRDKGLYHVHIIDTEKTYTRTIDLSGHAYDKAFAEFTTLKEEAYA
EANRGKVLGGLPDVVTIMEKKTLSLTCTVCGDPKPQVTWLKNGVEVYPDGQYLVSLESGR
FASLTIKGVSLEDCGRYSMTVQNKYGGESVDIVVSVYKHGDTIPQAKPTLTPKSVIPPKR
PIEIPGPKVVTPAPSPAPSHVSSPAGAKSPTPPRGLKTPTPARSMKSPTPSKRK
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacagttgccagacacaagcacgtgcacgtcagccacgactaccacagtgca
cagtctaaggttgtagcaaagcagtatacaagctctgaggtggtggaggacgattatcat
cacaaacaagaaacaagaatccagggagtggtgcggaagaagatggttgagaagtacgtt
cgtgaggagtctatgatcaggggtcctaaattcctgaccacactccgatcccataccgtt
tgggagcaaactcctgtgaaactgtattgtacggtcgagggttaccctaccccacttgtg
aaatggtataaagatggtgtcagcattgacagatcatcaatgaaatacaatgtgcaggac
aatgtcggaattcataccctgcagattgccaagtgtgaaactgacgacactgcgcagtac
actgctgtggctggtaacattcatggacaggtctctactcaggcctctgtcattgtcaag
aggttcagagaagaagggcattcatcttcctatgcatggcttccttacaaaattcccatg
ttgccggatatcaaatacaccaagatcaacgtcaccttcctggagacttttggctcggtc
tttggaacagagggagacacggtcaccttggctgccacaatgacagctagccccaaacta
gccaatctgcagcctgaagctcaatggttcagagatgatcatcggctgtcagactccaag
tgggtgaagatagagtctgctagaggcgagaccaagctgaccctgcctcacctgaacaag
gatgatgagggcgtctactccctccgtatggttacgaaggggggagacgctgtccacagt
gcatttgtttcctgttcagatggtcctcccccagtgcctggggctccaggtgcccctatg
gacatcaagatccatgatgccaacagagattatgtcatcgtgtcctggaagcctcccaac
accaccactgaaggtcccatcatcggatactttgtagatagatgtgaaactggaactgaa
aattgggtgcagtgcaacgactcccccattaagatctgtaaatcccctgtgcctggcctg
ttcgagggccactcctactatttccgtgtgcgggcgataaactcacaaggcatcagcaag
ccctccagaatctctgaccctatcgccgccctggaccccactgaatttgaaagactccac
gctgtcatgttgggtggaaaacttgacgttgtaacttaccacgatgacgttgaagatggg
aagaaggtgccaggaaccccctccaagttgcgtgcttcagagactgaccgaacatatgtt
gtcctcagctggaaacctgccccttatcacggccgggccccagtgtggtattatattgag
aagtccttggccgagagctgtgcgtggcagagggtgaacactcaggtgcctgtgagatct
cctcgctatgccgtgtttgacttggctgagggaaaacagtacttgttccgcgtgctggct
gcaaacatgtacggcaccagtgaagcctccgagcccacagagcccattcagacccaagag
ctgcgcggggtcccctccgctcctggtcaggtggttgccacaagggagactgacacgtct
cttgttatccaatgggctgaacccaaggagcctaataaccttattggatattacattgat
gtgtgtgtaaaaggctccaagaactgggcttcagctaaccacaagcctcacaagaacaac
aagtttgtggttcaaggtttgaccactggtgagacgtatgttttccgtgtgcaagccatc
aatgagctgggtcttagtgatgaatcacaggaatcctcacccctctctgtcaaagctgcc
ctcacaaccccctctgctccgtatgacattgctctgctggcctgtgatggagagtccatg
gttctgaactggaagctcccagtccgctccggtggctctccggtgactgaatactacatc
gacaaacataggcacggagaacacacatggagagaggtcaacatctcaccaatcaaagag
cggctgttcaaggttgaacatctgagtgcaggtgcagtctatgagttcatggtttatggt
ggaagtcttgctggtcttggtgccccctctgcccccagcaaggccttccattgtgatgcc
tggaccatacccgagccaggtccagcctatgacatgaccttctgcgagatccgcgatgac
tctgtggtggtggagtggaaggctcccgtctacaccggcaccagcccgatcacaggctac
tttgttgactttgcaaagaaaggctcagacgaatggcactgttccaacgagagccatgct
gtcagtcaccgctaccacaaggtgactgggctggaagccggagtgtcctatgtgttcaga
gtgcgcgcggcgaacgctgaaggtgccggcaagccttccttggcttctaaccctgtggtt
gccaaagcagtggaaggtgcccaagagataacctgcacagtggatgaggagtcaggtgac
atcatcctgtcatttgaaagttgtcaaattactgagagctcccactttgtgtggaagaaa
ttctataaggaaatcactgacttctccaaaggcattgtcatcaaaacagagggcagcacc
tccaagcttattttcaaacacccagaccagggggatgtgggctgtttctccgttgctgta
actaacactgatggtgtttctgccagccatgaaatccatgctgaagagctggagaaaatg
ctggcaaagagctatggtatcagacacccagtgattcctctaaagactcagctggcctac
aagattctggagcgcggtcgcatgcgcttctggctgcaggctgagcacatctcctctgct
gtcacctataagttcttagctaacaacaatgaactctcaccgactagcccaaatcatgcg
agtcacgacgtggaggctggcatcattgagtttgtgctggatcatttcacagaggatagt
gagggcacttttactgttcagattgaggatggcaaagccagaggacagtcctctctggtg
ctaatcggagctgatttcaaggcagctctcgcagacgcagaacaccaaaggagcgagtac
atcagagtgaaagaaggcccctacttcagtgagtttctgtcagtccatgtcggggatgac
tgctctgtggcgctcgtctgcaaggtggataatctgaagaaggaaactgcgctgcactgg
ttcaaggataacgttgagattacccctgaagggccagtcagtctggcatctggagccaga
gactcagggagcaagcttcctatatccctgttctccaaggcttccactggcatttacaaa
gctaccatcagtgacaacagaggaaaggatcagtcccaaattgatatatccggccatgct
tttgatgaaattatcgacaagctttctaaacttgctggatcctctgcagctgagttggca
attcacagcactgcaacaggcattcagctccaatgccacatgaaatactatacagaagag
atgaaaatccattggctgcacgtggacagtaaactctctcactctgagaaggtgcatatt
ggaggtacccctgccatggccagtatggagatccttgaacccacagacagggataagggt
ctttaccacgtccatataatagatacggagaagacctacactcgcaccattgacctttct
ggacacgcctacgataaagcctttgcagaattcacaactctaaaagaggaagcatatgct
gaagccaaccgtggcaaagtgctgggcggtctccctgatgttgttaccatcatggagaag
aagaccctgagtttgacctgcacagtgtgcggtgaccccaaacctcaagtcacctggtta
aaaaatggtgtggaggtgtatcccgatggccagtacttggtgtcccttgagtccgggagg
ttcgccagtctcaccatcaagggtgtgtccctggaagactgtggcaggtactctatgacg
gtgcagaacaaatatggaggagagtctgtggatatcgttgtgagcgtctacaagcatgga
gacacgattccacaggccaaaccaacgctaacgcccaagtccgtcatcccacctaaacgc
cctattgagatcccaggtcccaaggttgtcacgcctgccccttccccagccccttcccat
gtctcttctccagccggtgccaagtcccccacccctcctaggggactgaagactcccacc
ccagctcgtagcatgaagtcccctaccccatcaaagagaaagtaa
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