Coregonus clupeaformis (lake whitefish): 121547688
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Entry
121547688 CDS
T08357
Name
(RefSeq) chitin synthase chs-2-like isoform X1
KO
K00698
chitin synthase [EC:
2.4.1.16
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00520
Amino sugar and nucleotide sugar metabolism
cclu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
121547688
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
121547688
Enzymes [BR:
cclu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.16 chitin synthase
121547688
Glycosyltransferases [BR:
cclu01003
]
Polysaccharide
Structural polysaccharide
121547688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chitin_synth_2
Glyco_trans_2_3
Glyco_tranf_2_3
DUF4519
Motif
Other DBs
NCBI-GeneID:
121547688
NCBI-ProteinID:
XP_041715014
LinkDB
All DBs
Position
31:complement(38239523..38256799)
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AA seq
1438 aa
AA seq
DB search
MEELKFRGRKREGRHRDTWDPFQLNPIGAEKEEKRRCFELFQHLVAAFVGIMVLSSAVIS
KGSLLVLSTLSSPTSTRTPKERQYYMLMLVCSLVVPNLLVFLKSLWKCAFKNFVPPNMRT
MGIVCGIECLVSLGTSILVLVVMPQFDVLTNLFISGGVCMLSSVLQIAFRLQRENWKIIF
PICSLMLVLTGYCLLGADYYVRVTSFVSLQENDCYWYVGIAVFSSFLVSLTWWENPVQAS
NNMHEMLTELDTFRDFVFVISSLLRVVVIAAVYLIYHALIQENIVWSDFDFTPKADEDES
TIARHKETLDIGLTVLFLQAFFSAACHWFGVVACKIHSVRMSFAFPVCFTGPAVLILGMI
LFLTQSEYLAGADTTSIIDFCSSLVDLSTKNTSAVVMLELTKSICRTSLNSHYWTWPFSL
LALEGICMWLGLITCTYYVWNFKVQRIERTTELFVRRLYESAFIDLSLLLNTKMKVVQTR
NQESSVVDDIENCVIYLCATMWHETYDEMLKILTSMFRLDRYRGDPKEEHKDVFDFECHI
FVDDAYMIEKKTGKKLINEYVTDLIHVVIEVYRVFTNKEPDDVSIIETPYGGRLMFVMPE
GNMLYFHLKDKQLIRNKKRWSQIMYLYYLLGWKGYSVKNPQKITRQNNPCRASLISLDGE
SFLLPQHDNDSKRKHISDDNTYIMALDGDTDFQPAALILLVDRLRKYGNVGAACGRIHPT
GMGPMVWYQKFEYAVGHWLQKTAEHVFGSVLCSPGCFSLFRGSALMDDNVLKRYTTTATR
ASEYVQYDQGEDRWLCTLLLQQGWRVEYNAASDAYTNSPQEFKEFYNQRRRWGPSTLANT
LDLLHSGNETVKRNSSISRLYIFYQIFTVSSSILGPASVSLMIAGAFQFVFKIEGTLSII
ISVIPPIFYMFICFLAKPNTQITIAGIMSVLYAFLMLASFFAIIGDMATQGTFITPTGLF
LLSMAAMYLVTALLHPQEFSMIIYGLMYFICIPSGYLLLTIYSLVNMHIVTWGTRETNKE
KEERKTQNVLCDRNCKICCWDMKLQVTQETDNLMLQQLQQAVNPNTQVTQQVVQEQKPDT
KEEKNNALNEEKNKEISPELLERRRAKKDKDSESDTSSVDSVPKKESAYSSIEDDNDDNH
DDDDDNMGYAGSVYSGFTEEEREIVPQSDWVQPVKEEFLKKLTYANLKRNLQEQIRYTLR
NKNQEDVCEELVMMLTDTVNGELKDKVGPEDVLSDSQLEELQYALNEAARRILKTNRMER
LERRVKRAIEKTLIAPQVEKLTEDELDFWKKLLERYLAPIVDDKAHKEQVTKELKSLRNK
AVFLYFIVNVLWIVATFFLQAIGNDVISIKIQKVWPNGTSSGEYLKVEPLSLMFLLSFAV
LLVVQFLAMLYHRVYTLIHVVSYRSTEKDYIPREEEDEEGIILENQIANGLVITSDDL
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atggaagagctcaaattcagagggcggaaaagggaagggaggcacagggacacctgggat
cctttccagttgaatcccattggtgctgagaaagaggaaaagagaagatgctttgagttg
ttccagcacctggtggcagcgtttgtggggataatggtcctgtccagtgctgtcatcagc
aagggctctctactggttctctccacactctcaagccccacatcgactaggactcccaag
gaaagacaatactacatgctcatgctggtgtgctctttggtggtgcccaacctgctcgtg
ttcctcaagtcactgtggaaatgcgctttcaagaacttcgtcccaccaaacatgagaact
atgggaattgtgtgtgggattgaatgcttggtgtctcttgggacctccatcctggtgctg
gtagtgatgccccagtttgacgtgctgaccaacctcttcatctctggcggagtctgcatg
ctttcctctgttctacagatagcatttcgcctgcagagagagaactggaagatcatcttc
cctatttgttctcttatgcttgtcctgaccggctactgtcttctcggggcagactattac
gttcgtgttacctcgtttgtatcacttcaggaaaatgactgttattggtatgttggcatt
gcagttttttcatcttttctggtttctctgacctggtgggaaaacccagtgcaggcgagc
aacaacatgcacgaaatgctgactgagttggacaccttcagagattttgtatttgtgata
tcgagtctcctaagggtcgtagtcattgctgctgtgtacctcatctaccacgcgttgata
caggaaaacattgtatggtcagattttgatttcactcctaaggccgatgaagatgaaagt
acaattgcgaggcataaagagacccttgatattggtcttactgtccttttcctccaagcc
tttttctccgctgcatgccattggtttggggtggtggcttgtaagatccactccgtgcga
atgagcttcgccttccctgtctgttttaccgggcccgccgttctcatcctcggcatgatc
cttttcctaacgcaatctgaatacctagctggggccgacacaacttctatcatagacttt
tgctcgagcctagtggacctgagcaccaagaacaccagcgcagtcgtgatgctggagctc
accaagagcatctgcaggacttctttgaacagccattactggacctggcctttctcccta
cttgcgctggagggcatttgcatgtggctcgggctcatcacatgcacctactacgtgtgg
aacttcaaggtccagaggatcgagcgcacaactgagctgtttgtacgacgcctctatgag
tctgccttcatcgacctgtctctgcttctgaacaccaagatgaaggttgtgcaaacgagg
aaccaggagagtagtgttgttgacgacattgagaattgtgtcatttacctctgtgcaaca
atgtggcatgagacctatgacgagatgttgaagatcctcacatccatgttcaggttggac
cggtacagaggtgatccaaaagaggaacataaagatgtttttgactttgagtgccacata
tttgtagatgatgcatacatgatagaaaagaagacgggcaaaaagttaatcaacgaatat
gtgaccgatctcattcatgtggtcatagaggtttacagggtattcaccaataaggagccc
gatgatgtgtcaattatcgagactccctatggtggccgattaatgtttgtgatgccagaa
ggaaacatgctgtatttccatttgaaagacaaacagctgatcagaaacaagaagagatgg
tcacagatcatgtacctctactatctgcttggatggaaaggatacagtgtgaagaatcct
cagaagataacgagacagaataatccttgccgtgccagtctcatatcattggatggggag
agtttcctgttgccacagcatgacaatgacagtaagagaaaacacatctctgatgacaat
acctacatcatggccctggatggggacacagacttccagcccgcagctctgatattactg
gtggaccgacttcggaagtacggcaatgtgggtgctgcatgcggaagaatccaccctaca
ggaatgggtccaatggtgtggtatcagaaatttgagtatgccgttggtcactggctccag
aaaacagctgagcacgtgtttggttcagtcctctgcagtcccggatgcttcagcttgttc
aggggatcagctctgatggatgacaatgtgctcaagagatacaccaccactgcaactaga
gcctccgagtacgttcaatatgatcaaggtgaggaccgctggctgtgcaccctgctcctt
cagcagggctggagagtggagtacaacgctgcgtcggacgcctacaccaactcccctcag
gagttcaaagagttctacaaccagaggcggcgctgggggccgtccactctggccaacacc
ctggacctcctgcacagcggcaatgagacggtcaagaggaactcttctatctccagactg
tacatcttctaccagatatttactgtcagctcatccattctcggtcctgcctctgtatct
ctgatgatagcaggtgctttccagtttgtgttcaaaattgaaggaaccctgtccatcata
atatcagtcatcccacctattttctacatgttcatttgttttctggctaaaccaaacacc
cagatcaccatcgcaggcattatgagtgtgttgtacgcctttctgatgttggcatcattc
ttcgccatcatcggtgacatggctacgcagggcacattcatcaccccaactggcctcttc
ctgttgtccatggctgccatgtacctggtgacagccctccttcacccccaggagttcagc
atgatcatctatggtctgatgtacttcatctgtatccccagtggttatctcttgctcaca
atctactccctggtgaacatgcacattgtcacatggggcaccagagagacaaacaaggag
aaagaagagaggaagacccagaatgttctctgtgatcgcaactgcaaaatttgctgttgg
gatatgaaactacaagtcacccaagagaccgacaacttgatgctccagcaactccagcag
gcagtgaatccaaacacacaagtcacccagcaagtggtgcaagaacagaagcccgacacc
aaggaagagaaaaacaacgcactgaatgaagaaaagaataaggaaataagtccagagctt
ttagaaagaagaagagccaagaaagacaaagactcagaatctgatacaagcagtgttgac
agcgttcctaaaaaggagagtgcctattccagcattgaagatgacaacgacgataaccat
gacgatgacgatgataatatgggttatgccggttcggtttacagtggcttcaccgaggaa
gaaagagaaattgtacctcaaagtgattgggttcagcctgtcaaggaagagttcctgaag
aaattgacctacgccaacttgaaaaggaaccttcaggagcagatccgctacacactgagg
aacaagaaccaggaggatgtgtgtgaggagctggtgatgatgttgacggacacggtgaac
ggcgagctgaaggacaaggtgggcccagaagacgtgctgagcgacagccagctagaagag
ctgcagtacgcccttaacgaggctgccaggaggatcctgaaaaccaaccgcatggagagg
cttgagaggagggtgaaaagagccatagagaagaccctcattgccccacaggtggagaaa
ctcactgaggatgaactcgacttttggaagaaactgctcgagagatacctcgcacctatc
gttgacgacaaagctcataaagagcaggtgacaaaggaactgaagtcactacgaaacaag
gcagtgtttctgtatttcatcgtcaacgttttgtggatagtggccactttctttttacaa
gccattggaaatgatgtgattagtatcaagattcagaaagtctggccaaatggcacatca
tcaggagaatacctgaaggtggagcctctcagtctgatgttcctcttgtcattcgctgtg
cttctcgtggtgcagttcctggctatgctttaccacagagtttatactcttatccacgtg
gtgtcgtacagaagcacagaaaaagactacattcccagagaagaggaggacgaggagggg
attattcttgagaaccagatagccaacggccttgtgatcaccagtgatgacttgtga
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integrated database retrieval system
