Coregonus clupeaformis (lake whitefish): 121547691
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Entry
121547691 CDS
T08357
Name
(RefSeq) nucleolar RNA helicase 2 isoform X1
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cclu03009
]
121547691
03036 Chromosome and associated proteins [BR:
cclu03036
]
121547691
Enzymes [BR:
cclu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121547691
Ribosome biogenesis [BR:
cclu03009
]
Eukaryotic type
Pre-60S particles
Helicases
121547691
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
121547691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Gly_acyl_tr_C
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
121547691
NCBI-ProteinID:
XP_041715018
LinkDB
All DBs
Position
31:38315289..38321361
Genome browser
AA seq
757 aa
AA seq
DB search
MPSKITFETEDIGKEGEMDISSGSTTPKKIKEKKTKEGKKIKKQKTVVEEEPDCEPPAPK
KKKKKNKKEEVEKANGEVNKSIDVNGNIEESPLKDNTSHSNEESADNDKATEQKKKKKKN
KKKTEEEVVVNGVLPETPKLIAQTNGHTAATTPGQSSEDSDSGKETETPEQKEGSFSNFR
ISPNTIKLLQARGISYLFDIQTQTFNSVYEGKDVIGQARTGTGKTLAFAIPLIEKLQNDP
DDKRRGRAPKVLCLTPTRELAIQVSKDFKEMTNKLSVTCFYGGSSYHPQLDAIRSGIDVL
VGTPGRIKDHLQNNKLDLSQLKHVVLDEVDQMLDMGFAEQVEEILSASYQKGSETNPQTL
LFSATCPAWVYDVAKRYMRPTYAHVDLIGKKTQKTATTVEHLAIACHWSQRAAVIGDVVQ
VYSGSHGRTIVFCETKKDANELSMNASIKQSSQSLHGDIPQKQREITLKGFRSGTFEVLV
ATNVAARGLDIPEVDLVVQCSPPKDVESYIHRSGRTGRAGRTGVCICFYQRKEEDQLRYV
EQKAGITFKRVGVPTANDIIKSSSKDAVRFLDSVPPQAIEYFRVSATKLIEERGAVEALS
AALAHISGATALEQRSLLNSDAGYTTMTMNCSQELHNIGCAWRGLKEQLGEEIDNMIRGM
TFLKGKMGVCFDVPADKVKEYQDAWQDGRRWQLSIATELPELEEKQRMGGDGGDRGYGRS
FGGRGGGRGFRNGGGGGGGNWRGGGSHKRSFSSAFDY
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgccatcaaagataacttttgaaaccgaagacatcgggaaggaaggtgaaatggacatt
agttcgggcagtacgacacccaaaaaaataaaggagaagaagaccaaggagggaaagaaa
atcaagaaacagaaaacggttgttgaagaggaacctgactgtgaacctcctgctcccaag
aagaagaagaagaagaacaagaaagaagaagtggagaaagcaaacggggaggtgaacaaa
tcaattgatgttaatggcaacatagaagaatcacctttgaaggacaacacatctcattcc
aatgaggagtctgcagacaatgacaaagcaaccgagcagaagaagaagaagaagaaaaat
aaaaaaaagacagaagaagaagtcgtcgtcaacggagtgttgcctgagactcccaagctg
atcgcacaaaccaatgggcataccgcggcgacaactccaggacaatcaagcgaggactca
gacagtggaaaagaaaccgagacaccagaacagaaagagggatccttctctaacttcaga
atctcccccaacaccattaaactacttcaagcaagaggcatatcttacctctttgacatc
caaacccaaaccttcaattctgtgtacgagggaaaagatgtgattggccaggcaagaaca
ggcactggtaaaacgttagcttttgccattccgctgatcgagaaactccaaaatgacccc
gatgacaagaggaggggcagagccccaaaggttctgtgccttactccaaccagagaattg
gcaattcaagtatccaaggatttcaaggagatgacaaataaactgtctgttacctgtttc
tatggtgggagctcctaccatccccaacttgacgcaatccgcagtggcatcgatgtccta
gtgggaactccaggtcgtatcaaggaccatctacagaataacaaacttgacctgtctcaa
ttgaagcacgttgtattagatgaagtcgaccaaatgcttgatatgggctttgcagaacag
gtggaggagatactttctgcatcttaccaaaaaggctctgagaccaacccccagaccctg
ctcttctctgccacatgcccagcatgggtgtatgatgtggcgaagaggtacatgaggcca
acctatgcgcatgttgacctcattggcaaaaagacccagaaaactgccaccacagtggag
caccttgccatagcatgtcactggtcccagagggctgcagtcattggggatgtggtgcag
gtgtacagcgggagccacggccgcaccatcgtcttctgtgagaccaagaaggatgccaac
gagctgtcaatgaatgcctccataaaacagagttcccagtcacttcatggggacattcct
cagaagcagagggagatcacactgaaaggcttcagaagtggcaccttcgaggtcttagtg
gccaccaacgttgctgcccgtgggttggacatcccagaggtagacctggttgtgcagtgc
tcacccccaaaggatgtggagtcctacattcaccggtcaggtcgaactggtcgggctggc
aggactggcgtctgcatctgtttctaccaacgcaaagaggaagaccagctccgatacgta
gagcagaaagcaggcattacatttaagcgagttggagtgcccactgccaatgacatcatc
aaatcctccagtaaagatgcagtgaggtttttagactctgtgcctccccaagccattgag
tacttccgtgtgtctgctaccaagctgattgaggagcgtggggccgtggaggccctgtct
gccgccctggcacacatatcaggagccactgccctggagcaaagatccctcctcaactct
gacgctggctacaccacaatgacaatgaactgctcccaggagctgcacaacattggctgc
gcctggcgtggtctgaaggagcagctgggagaggagattgacaacatgatccgggggatg
accttcctcaagggcaaaatgggagtctgttttgacgttccggctgacaaagtaaaggag
taccaggatgcctggcaggacggcagacgttggcagctgtcaatcgccacagagcttcct
gagctggaggagaaacagcgcatgggtggtgacggcggcgaccgtggatacggacgttcc
ttcggaggacggggaggtggccgtggcttcagaaatggcggcggtggaggcggcggcaac
tggagaggtggaggcagtcataaacgaagcttcagcagtgcgtttgattattaa
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