Coregonus clupeaformis (lake whitefish): 121547694
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Entry
121547694 CDS
T08357
Name
(RefSeq) vacuolar protein sorting-associated protein 26A
KO
K18466
vacuolar protein sorting-associated protein 26A/B
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121547694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121547694
Membrane trafficking [BR:
cclu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
121547694
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps26
Arrestin_N
Motif
Other DBs
NCBI-GeneID:
121547694
NCBI-ProteinID:
XP_041715022
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Position
31:38417389..38427955
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AA seq
328 aa
AA seq
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MSFLGGLFGPVCEIDVLLNDAETRKTAELKTEDGKVDKNYLFYDGESVSGKVNLNVRQTG
KRLEHQGIRIEFVGQIELFNDKSNTHEFVNLVKELALPGELTQNRSYDFEFIQVEKPYES
YVGTNVRLRYFLKVTVVRRLSDLVKEYDLIVHQLATYPDVNNSIKMEVGIEDCLHIEFEY
NKSKYHLKDVIVGKIYFLLVRIKIQHMELQLIKKEMTGIGPSTTTETDTVAKYEIMDGAP
VKGESIPIRLFLAGYDLTATMRDVNKKFSVRYFLNLVLVDEEDRRYFKQQEVVLWRKAPE
KIKKRNFHQRYESPEPRLTLTAEQQPEM
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcctgggtggtttatttggtcctgtgtgtgaaattgacgtcctactcaatgat
gcagagactaggaagaccgcagaactcaagacagaggatggaaaagtggataagaactac
ctgttttatgatggagaatctgtctctgggaaggtgaatctcaatgtgaggcagacaggc
aagagactagaacaccaagggattcgaattgagtttgttgggcagattgagctcttcaat
gataaaagcaacacacatgaatttgtgaacctggtgaaggagcttgccttgccaggggag
ttgacccagaaccgaagctacgactttgagttcatacaggtggagaagccctatgagtct
tacgttggaaccaacgtccgactcagatatttcctcaaagtgacagtagtgaggagactg
tctgatctggtgaaagagtatgacctcattgtccatcagctggccacttaccctgatgtg
aacaattccattaagatggaagttggcattgaagactgtctgcacatagagtttgaatac
aacaagtccaaataccacttgaaagatgtaattgtgggtaaaatctatttccttctggtg
agaatcaaaatccagcacatggaacttcagttgatcaagaaggagatgactggaataggg
cctagcacaactacagagacggacactgttgccaagtatgagataatggacggcgcccct
gtgaaaggagagtccattcccatccgtctgtttttggctggctacgacctgacagccacc
atgagggacgtcaacaagaagttctctgtgcggtacttcctcaacctggtgctggtggat
gaggaggacaggagatacttcaaacagcaggaagtcgttctctggaggaaagctcctgag
aaaataaagaaacggaacttccaccaacgctacgagtcgccagagccacggctgaccctt
actgctgagcagcaacccgaaatgtga
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