Coregonus clupeaformis (lake whitefish): 121547699
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Entry
121547699 CDS
T08357
Name
(RefSeq) RUN and FYVE domain-containing protein 2-like isoform X1
KO
K12482
RUN and FYVE domain-containing protein 1/2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121547699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121547699
Membrane trafficking [BR:
cclu04131
]
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
121547699
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RUN
FYVE
Trimer_CC
PPP1R21_C
bZIP_1
zf-RING_5
FYVE_CARP1-2
Motif
Other DBs
NCBI-GeneID:
121547699
NCBI-ProteinID:
XP_041715027
LinkDB
All DBs
Position
31:38563705..38581757
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AA seq
700 aa
AA seq
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MATPAEHDLALAEAESNKEKSQVFGILRFQEEKSAGEKASTNTSTTMRAGDGRWQAPIFA
LARKASETFSGSSSHVLAKVAEPTSFVNEWSAQALRDPMAMERANLLNMAKLSIKGLIES
ALSFGRTLDSDYPPLQQFFVVMEHCLKHGLRVKKSFLGYNKSLWGPLEMVEKLCPEAGEI
AASVRDLPGLKTPLGRARAWLRLALMQKRLADYLHLLITRKDLLSDFYENSAVMVEEEGA
VIVGLLVGLNVIDANLCVKGEDLDTQVGVIDFSMYLKNDIDDYRSEERNGQIAAILDQKN
YVEELNRQLNSSVHGLQGRVDNLEKSNSKLIEELAIAKNNIIKLQEENHQLRNENTIILM
NAQQQLEVTQVDVDVELDTYKKSRQGLDEMYNEARRQLREECQLRQDVENELVVQVSMKQ
EMDLAMKLLEKDIHEKQDTLIGLRHQLDDVKAINVEMYTKIQTSDDGMKQKNDMITRLEE
KTNQITATMKQLEQRLQEADRDRWTAEDGARKFKQDFANKADSLQKQIAQRENQRLQLET
DLKIEKEWQQTLQNDLERERGNVAQLSAEAQQINGLKNEFHRLQDENSQLTGICDEQEQA
LEELGCKLSESKLKIEDIKEANKALQGGQIWLKDKEANICKLCEKEFSISRRKHHCRNCG
EIFCNACSDNELPLPASPKPVRVCDTCHALLLQRCSSNAT
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacctgcagagcacgaccttgcattagctgaagcagagagcaacaaagaaaag
tctcaagtattcggaatccttaggtttcaggaagaaaaatcggcgggtgaaaaagctagc
accaacacgtccacgaccatgagagcaggggacgggagatggcaggcacccatatttgca
ctagccaggaaagcatcggagaccttttcaggaagcagcagtcatgttttggcgaaggta
gcggaaccaacatcttttgtaaacgaatggagtgcccaagctctgcgggaccctatggcg
atggagagagccaacctgctgaacatggccaagctcagcatcaaaggcctgatcgagtcg
gccctcagttttggacgcacactggactcggactaccccccactccagcagtttttcgtt
gtcatggagcactgcctcaaacatggtctcagagtgaagaagtcatttcttgggtacaac
aagtccttatggggtcctctggagatggtggagaagttgtgtcccgaggcaggagagatc
gcagccagcgtcagggacctaccaggactaaagactccgctgggcagagctcgggcctgg
ctacgtctggccctgatgcagaagaggctggctgattacctccaccttctgattaccaga
aaggacctgctgagtgatttctatgagaattctgctgtgatggtagaggaggagggtgct
gtcatcgttggcctgctggtgggactcaatgtgatcgatgccaacctgtgtgtcaaggga
gaagacctggatacacaggttggggtcattgacttctccatgtacttgaaaaatgacatt
gatgactacagaagtgaagaaagaaatggtcaaatagcagctatcctggaccagaagaac
tacgttgaagaattaaacagacagcttaattcttcagtacacggcttacaagggagggtc
gataacttggagaaatcaaactctaaactcattgaggagctggcgattgcaaagaacaac
ataatcaaactacaagaggagaatcatcagcttagaaatgagaacactattattctcatg
aatgctcagcagcaacttgaggtgacccaggtggacgtcgacgtggagctggacacctat
aagaagtcgaggcagggcctggacgagatgtacaacgaggccaggagacagctcagggag
gagtgtcaactacgccaggatgtggagaatgagttggtggtgcaggtgagcatgaagcag
gagatggatctggccatgaaactgttggagaaggacatccacgagaagcaggacacactg
atcggcttgcgccaccagctggacgatgtcaaggccatcaacgtggaaatgtacacaaaa
atacagacttccgatgacggcatgaaacagaagaacgacatgatcactcgtttggaggag
aagaccaatcaaatcacagcaaccatgaaacagctggagcaaagattacaggaggctgat
cgggaccgctggaccgcagaagatggagcgcgcaaattcaagcaggactttgccaacaaa
gccgacagcctccaaaagcagatagcccagagagagaaccagaggttgcagctggagacc
gacctaaagattgagaaggagtggcagcagaccttacagaacgacctggagagggaacgt
gggaacgtcgcccagctcagtgctgaagcccagcaaataaatggacttaaaaatgagttc
cacaggctgcaggatgagaacagccagctgacggggatatgtgacgaacaggagcaggcc
ctggaggagctgggctgcaaacttagcgaatcaaaacttaaaatcgaagacataaaagag
gcaaataaagctcttcagggggggcagatctggctgaaggacaaagaagctaacatctgt
aaactgtgtgagaaggagttctccatctctcggagaaagcaccactgtagaaactgtggg
gagatcttctgcaatgcctgctctgacaacgagctgcccctccctgcctcgccaaaacca
gtgagggtctgtgatacgtgccacgcccttctcctccaacgctgctcctcaaatgccacg
tga
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