Coregonus clupeaformis (lake whitefish): 121547715
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Entry
121547715 CDS
T08357
Name
(RefSeq) serine/arginine-rich splicing factor 2
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03040
Spliceosome
cclu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121547715
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121547715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121547715
Spliceosome [BR:
cclu03041
]
Common components
Common spliceosomal components
SR proteins
121547715
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBD_AKAP-17A
RRM_PARP14_3
RRM_3
RRM_8
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
121547715
NCBI-ProteinID:
XP_041715062
LinkDB
All DBs
Position
31:complement(39200671..39205087)
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AA seq
213 aa
AA seq
DB search
MSYGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV
RFHDNRDAEDAMDAMDGALLDGRELRVQMARYGRPPDSHFGRRGGGGPPRRHGGYGRRSR
SRSASPRRRRRSRSRSRSRSRSRGRDYSRSRSRSYSRSRSKSRTPRKSKSPSRSRSRGAS
RSRSRSPASNRGSKSRSRSKSRPKSPEDNGTDS
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgagctacggaaggcccccgcccgatgtcgagggtatgacctcgctcaaagtggacaat
ctcacctacaggacctctcctgagacactacgacgagttttcgagaagtacggccgggtg
ggagacgtgtacatcccccgcgatcggtacaccaaggagagccgtggtttcgccttcgtg
cggttccatgataaccgcgacgctgaagatgcgatggacgcgatggacggggccttgctt
gacgggcgggaactgcgagtccagatggcgcgctatggccgtccaccagactctcacttc
gggcgccgaggcggcggtggacccccaaggagacacggaggctatggtcgcaggagcagg
agtcgttcggccagcccccgtcggcgcagacgcagtcgttcccggagcaggagccgctcc
cgcagccgtggccgtgactacagccgttcccgttctcgttcctactctagatcccgttcc
aagtcccgcacccctcgcaagagcaagtccccatctcgatccaggtcccgtggagcttcc
aggtcccgctcccgcagcccggcttccaacagaggctccaaatccaggtcgaggtccaag
agcaggcccaagtcccccgaggacaacggaaccgactcttaa
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