Coregonus clupeaformis (lake whitefish): 121547801
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Entry
121547801 CDS
T08357
Symbol
setdb2
Name
(RefSeq) histone-lysine N-methyltransferase SETDB2 isoform X1
KO
K18494
[histone H3]-lysine9 N-trimethyltransferase SETDB2 [EC:
2.1.1.355
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00310
Lysine degradation
cclu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
121547801 (setdb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121547801 (setdb2)
Enzymes [BR:
cclu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
121547801 (setdb2)
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
121547801 (setdb2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
121547801 (setdb2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
Pre-SET
MBD
Motif
Other DBs
NCBI-GeneID:
121547801
NCBI-ProteinID:
XP_041715153
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All DBs
Position
31:46841357..46845093
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AA seq
670 aa
AA seq
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MDGSEKTEVVRAKSFWVQVDVEQAFDELYEYLTHLKHAIKTCTATDREYVQGMNMITLLD
SGLIVTPATTATATTTAPATGNESFVEVVIGAEILTVSVPDIDDPQTPLPPQQTEPVSPP
SPLRYDGSILPLSPPYPNREDLLAPLVPLQLPYQLHTCSQACVPHLPPSAHHFRGHNPLR
IPLLCSFQRQCAATPPFTKVIETDCDETEPDSKGESSENSQGAELDSEVTGQGVVYKAPC
GLSLCTPGEVLCFLVATESHDVLQVDDFTFDPLVQLECLRPPQWRPPGPAERDLSRGSEP
TPVELCLGEEGVRPEDFRYRKERWPHGCFLSSGPLFTTCCDCTDGCGDAESCACARQTGG
KHYSHQRLSEPVPKGLYECGPWCGCDRGRCQNRVVQRGLRVRLQVFPTGDKGWGVRCRDD
LDRGTFVCTYAGVVLRAGLDSDKPLPPKRQKTELPSDDEVEVVDEWLAPAGEGRAHAETL
EPSPPCSPPDGLHVPVIQRPGVELSSQIQAVLVGSALPAQPLTGMEVEEGLEQENGVQKP
QLNSEPDLKEVDMKEVDMKEVDVKLSVSTSTSPQKLGPKQNPMEHLYYVDATKEGNVGRF
INHSCDPNLFVQNVFTDSHDPNFPVIAFFTSRVVKAGTELTWNYSHSPDSDPEQEVTCQC
GCEGCQGLLA
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggatgggtcagagaaaacagaagttgtgagggcaaagtcattctgggtacaggtggat
gtggaacaagcatttgatgagctgtatgaatatctgacacacctgaagcatgccatcaag
acctgcactgctacagacagagaatatgtccaagggatgaatatgattacgttattggat
tccgggctgattgtgacaccggcaactacagccacagctacaactacagcccctgccact
gggaatgagtcttttgtagaggtggttattggtgcagaaatcctcacagtttcagtccct
gatattgacgatccccagactccactgcccccccagcagacagagcccgtctcccctccc
tcaccccttcgttatgacggctccatcctcccgctgtcgcccccctaccccaacagagag
gacctcttggcccccctggtgcccctccagctcccctaccagctccatacctgcagccag
gcctgtgtgccccacctgcccccgtccgcacaccacttccggggccacaaccctctcagg
atccccctactctgctccttccagcggcagtgtgctgccaccccacctttcactaaagtg
attgagaccgattgtgatgagaccgaaccagactctaagggggagagctctgagaattct
cagggtgcagagttggactctgaggtcacagggcagggcgttgtttataaggctccctgt
gggctgagtctctgcaccccaggggaggtgttatgtttcctggttgccactgagagtcac
gacgtcctgcaggtggacgacttcacctttgaccccctggtgcagttggagtgtctgcgg
ccaccgcagtggcgcccacccgggccggccgagagggacctgagccgggggtcagagcca
actccggtggagttgtgcctgggggaggaaggagtgcggccggaggacttccgctacagg
aaggagcgttggcctcacggctgtttcctcagttcgggcccgctgttcaccacctgctgt
gactgcactgacggctgtggtgacgcggagagctgcgcctgcgctcggcagaccggcggc
aaacactactcccaccagaggctgtctgagcctgtgcctaaagggctgtacgaatgcggt
ccgtggtgtgggtgtgaccgtggcaggtgccagaaccgtgtggttcagcggggtctgcgc
gtccggctgcaagtcttccccaccggagacaaaggatggggggtgcgttgccgtgatgac
ctggacaggggcaccttcgtgtgcacgtacgcaggtgtagttctcagggcaggcctagat
tccgacaagcccctcccacccaagcgccagaagacggagcttccctccgacgacgaggtg
gaggtggtggatgagtggctggcaccggcaggagagggacgggcgcatgcagagaccctg
gagccctcgcccccctgctcacctcctgacgggcttcatgtgcccgttatccagaggccc
ggggtggagctttcttcacagatacaagctgtgttggtggggagcgccctgccagcccaa
cctctcacaggcatggaggttgaggaggggctggagcaagagaatggggtacagaagcca
cagttgaattccgaaccagacttgaaagaagtggacatgaaagaagtggacatgaaagaa
gtggatgtgaaactgtctgtgtccacaagcacaagcccccaaaaactgggcccaaagcag
aaccctatggagcacctgtattacgtagatgccacgaaggaggggaacgtgggaaggttc
ataaatcacagctgcgaccccaacctatttgtgcagaacgtcttcactgactctcatgac
ccaaacttccccgtcatcgccttcttcaccagcagagtggtgaaggcggggactgagttg
acctggaactactcccacagccctgacagtgacccggaacaggaggtgacatgtcagtgt
ggatgtgaaggctgtcagggactgctggcctga
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