Coregonus clupeaformis (lake whitefish): 121547808
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Entry
121547808 CDS
T08357
Name
(RefSeq) POU domain, class 2, transcription factor 1 isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121547808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121547808
03021 Transcription machinery [BR:
cclu03021
]
121547808
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
121547808
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
121547808
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pou
POU2F1_C
Homeodomain
Motif
Other DBs
NCBI-GeneID:
121547808
NCBI-ProteinID:
XP_041715164
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Position
31:complement(46863729..46876677)
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AA seq
622 aa
AA seq
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MADGEVMSQHESSGPDSVINLSASSKSTMENGDIVKGVLTNGRDSQKQTVMSLTNAQSQA
LLQQLTLSPAQQQLFLQQAQAQLLAAAVQQHSASQAQNSSTTGAAISASAATPITTQLPL
SQPIHITPLQQQGLQQFVLVQPGHSMATQLQPQFFISQTAQGQPSMFQYHNLLQAQHVLT
QLPQSQANLLQTPTITIAPQPATPTRTTPGQTPPPKGLGTPTLEDANDLEELEIFSKAFK
QRRIRLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENV
SSESSPSLSPLGSGHGSPSLASDLINRRRKKRTSIDTNIRVALEKSFLQQNQKPSSDEIS
LIADQLNMEKEVVRVWFCNRRQKEKRINPPSSSAFHKSIFSSPTTASLVNTVPQTTVTVT
PSLPVTSFSLTGTTLASATSNTASVISSTHTVPSMSLTPSSSVTTMSQPAVTMTQAGQML
YSNGGGLAAMAAAAAGISPSLMPSSQFNTGGALLNLTTGGFGGALATIQGVLSALASSGS
FPITTLDGNGNLLFANTSTSGSAPSMVNTPLFLNPQSMSLLASNPVSFIPASALNLQLTA
GTNTITTATTPVNTIVRASKAQ
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggctgacggcgaagtaatgagccaacatgaaagttcaggaccagactcagtaatcaac
ctgtcagcatccagtaaaagcactatggagaacggggacatagtcaaaggcgtgctgacc
aatggccgggactctcaaaagcagacggtcatgtccctcaccaacgcacagtcacaggct
ctactgcaacagttgaccctgtctccagcacagcagcagctgtttctccagcaggctcag
gcccagctccttgcagcagccgttcagcagcactctgccagccaggcccagaacagcagc
accacgggggccgccatctctgcctccgcagccacccccatcaccacccaactcccactc
tcccagcccatacacatcactcctctccagcagcagggcctgcagcagtttgtgttggtc
cagccaggtcattccatggccacccagctacagccacagttcttcatctcccagactgca
cagggacagcccagtatgtttcagtatcataatctcctgcaagcccaacatgttctcact
caactacctcagagccaagccaacctcctacagactccaaccatcacaatcgccccacag
ccggccacgcccacgcggaccacccccggccagactccgccccctaagggtctgggcacg
cccactctggaggacgccaatgatctggaggagctggagattttctccaaggccttcaaa
cagaggaggatcagactaggcttcacacagggtgacgtggggctggccatggggaagctg
tatggtaatgacttcagccagaccaccatctcccgctttgaagcactcaacctgagcttc
aagaatatgtgcaagctcaaaccgctactggagaagtggctcaatgatgcagagaatgtg
agctcagagtccagcccgagcctcagtcccctgggctctggccacggctcacccagccta
gcttctgacctcatcaaccggcgccgcaagaagaggaccagcatcgacaccaacatccgc
gtggccctggagaagagcttcctccagcaaaaccagaagccgtcgtcagacgagatctcc
ctgatagcagaccagctgaacatggagaaggaggtggtccgggtgtggttctgtaaccgc
cggcagaaggagaagcggatcaaccctcccagcagctcagctttccacaagtccatcttc
tcgtcccccactactgccagcctggtgaacactgtaccccagaccactgtgaccgtcacc
ccctctctgcctgtcaccagcttcagcctcacaggcacgaccctggcatcagccaccagc
aacacagcatccgtcatctccagcacccatacagtcccctctatgtccctcacaccctcc
tcctccgtgacaaccatgtcacagccagccgttaccatgacgcaggcggggcagatgctc
tacagcaacggagggggtctggcagcaatggcggctgcagcggcgggaatcagcccgagt
ctcatgccctcatcgcagttcaacacagggggggctttactgaacctaaccactggaggt
tttggaggagcactagccaccatccaaggtgtgttgagtgctctggcctccagcgggtcc
ttccccatcaccaccctggacgggaacgggaacctgctattcgctaacaccagcacgtcc
ggctccgcccccagcatggtgaacacgcccctcttcctgaacccccagagcatgtcctta
ttggctagtaaccctgtcagcttcatccccgctagtgccctcaacctgcaactcaccgcc
ggcaccaacaccatcaccacggcaaccacaccagtcaacaccatcgtcagagcctctaag
gcccaatga
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