Coregonus clupeaformis (lake whitefish): 121547862
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Entry
121547862 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: lutropin-choriogonadotropic hormone receptor-like
KO
K04248
lutropin-choriogonadotropic hormone receptor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04020
Calcium signaling pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121547862
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121547862
04081 Hormone signaling
121547862
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cclu04030
]
121547862
G protein-coupled receptors [BR:
cclu04030
]
Rhodopsin family
Peptide
Lutropin-choriogonadotropic hormone
121547862
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
LRR_8
LRR_5
LRR_R13L1-DRL21
DUF5368
Motif
Other DBs
NCBI-GeneID:
121547862
NCBI-ProteinID:
XP_045065860
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Position
31:complement(18493553..18522814)
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AA seq
708 aa
AA seq
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MASAKRTWWVVLALSGVLNVSSCWTFTCPSICECSMKSDTCYTYTREKLSCTRETQLKSQ
ATPSFIRNLRLTHLPLTEVPSNAFRGLINVSRIEISQSDCTRNIRSHAFLSLHSLAEIQI
QNIRNLISIEKGAFTDLPRLRYLSICNTGIIHFPDFSTISSLVILEYFFLELGDNMQLHS
IPANAFQGITEESVYMNIKKNGFKEIKSHAFNGTKLDRLILKDNRYLRNIHEDAFEGASG
PTVLDVSSTALHTLPRRGLGHLKVLIARSTPYLKTLPPLESLLELEVAEVTYPSHCCAFH
TWRRNREKVVLALSPNLRRLCDDDDEIKDNVTDLYDINLQYPDLQLSLCPGPFQCTPEPD
AFNPCEDLLGYSFLRSVTWLMTVFAVPGNMAVLVVLIISHQKLSVSRFLMCNLAFADLCM
GVYLLLIAAMDYHSRNEYYNYSTDWQMGTGCGVAGFLTVFASELSVYTLTMITLERCHTI
TNAMHKNKRLRLRHVMAFMAGGWGFSLLAALLPVLGVSSYTKVSICLPMDIESLASQVYV
VALLLLNITAFFIVCYCYVRIYLSIHNPDLATRHRDSKIAKRMAVLIFTDFLCMAPISFF
GISAALRMPLITVSHSKILLVLFYPINSLCNPFLYTIFTRSFRKDMRLLLSRCSCCHARA
EFYRAQNLEAHTIPPKDRTTSPRNHTLRFYTYHHKMQGCFLCKGGGAT
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggcatcggcaaagcgaacgtggtgggttgttctcgcgctgtccggtgttctgaatgtg
agctcctgctggactttcacttgtccgtcgatttgtgaatgttcaatgaagagcgataca
tgttacacatacaccagagagaaactcagttgcacgagggaaacacaactgaagtcccaa
gccactccatcattcattcgaaacttaagactaactcatctgccgttgactgaagttcca
agcaatgccttcagaggactgatcaacgtgtccagaattgagatctctcagagtgactgc
accaggaacataagaagtcatgcattcctctctctccacagcctagctgagatacagata
cagaacatcagaaatctgatcagtatagagaagggggccttcactgatcttcccaggctg
agatacctgagtatctgtaacacaggaataatacactttcctgacttctccaccatctcc
tccctggtgatactggagtacttcttccttgagctgggagacaacatgcagctccacagt
atacctgccaatgcctttcaagggatcacagaggagagtgtgtacatgaatattaaaaaa
aatggattcaaggaaatcaagtcgcacgctttcaacggaacaaagctggatagactgatt
ctgaaagacaacaggtatctgagaaacatccatgaagatgcctttgagggagcgtcaggg
ccaactgtgcttgacgtctcctccacagctctccacacacttccccgtcgaggcttggga
catttgaaggtcctgatcgcccgttctaccccctacctgaagactctaccccctctggaa
agcctcctagagctggaggtggcagaggtcacttaccccagccactgctgtgccttccac
acctggcgacgcaacagggaaaaagttgtccttgcactctctccgaacctcagaaggctg
tgcgatgatgatgacgaaatcaaggacaatgtgacagacctgtacgacatcaacctccaa
tacccagacctgcagctgagcctgtgtcctggacccttccagtgtaccccagagcccgat
gccttcaacccctgtgaggacctgctggggtattccttcctccgctcagtcacctggctc
atgactgtgtttgctgtgcccgggaacatggccgtgctggtcgtactaatcatcagccac
cagaagctcagtgtctctcggttcctgatgtgtaacctggccttcgcagacctctgcatg
ggggtatacctcctcctcattgcagccatggactaccactcacgcaatgagtactacaac
tactccacggactggcagatgggcacgggttgtggcgtggcggggttcctgacggtgttc
gccagcgagctgtcggtctacacactgaccatgataacgttagagcggtgccacaccatc
accaacgccatgcacaagaacaagaggctgcggctgaggcatgtgatggccttcatggct
ggggggtggggcttctctctattggccgctctgcttcctgtcctcggggtcagcagctac
actaaggtgtcgatctgcctgcccatggacatcgagtccctagcctcccaggtgtatgtt
gtagccctcctcctcctcaacatcaccgcctttttcatcgtctgctactgctacgtacgc
atctacctgtccatccacaaccccgacttagcaacccgccaccgtgactccaagatcgcc
aagcgcatggccgtcctaatcttcaccgacttcctctgcatggcacccatctcattcttt
ggcatctcggcggctctccgcatgcccctcatcaccgtctcccactccaagatcctcctc
gtcctcttctacccaatcaattccctctgtaacccgttcctctacaccatctttactcga
tcgtttcggaaggatatgcgtttgttgttgagtcgctgtagttgttgccatgccagagcg
gagttctacagggcacagaacctggaagcacacactataccacctaaggataggactacg
tcccccagaaaccatactctcaggttctacacctaccaccacaagatgcagggatgcttt
ctctgcaagggaggcggagccacatga
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