Coregonus clupeaformis (lake whitefish): 121547925
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Entry
121547925 CDS
T08357
Name
(RefSeq) homeobox protein Nkx-2.5-like
KO
K09343
homeobox protein Nkx-2.3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121547925
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
121547925
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
DUF7645
Motif
Other DBs
NCBI-GeneID:
121547925
NCBI-ProteinID:
XP_041715271
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Position
31:complement(35389068..35392049)
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AA seq
340 aa
AA seq
DB search
MIIMLRSPVMSASSTPFSVKDILKLELQQHAQQQRLASHLGPPHERSHPGPQQHPYTLQS
PPSCMLADRDSPSPGLSEEEERMSYLSSLAVQEQLMETGLAGEMFISPGLQGHSADTSLE
VEQEDINAKSCGAMGVRACEESAQAHSDSERLPKQQRTRRKPRVLFSQAQVFELERRFKQ
QRYLSAPEREHMANTLKLTSTQVKIWFQNRRYKCKRQRQDKTLEMAGHPHHPPPPRRVAV
PVLVRDGKPCLAGSQNYNTSYTVGAASPFSYNGYPAYTYNNPVYTNTYSCTYSSLPALAP
NSTANAFMNMGLANLGASTSQAQTPQGTGCQGTLQGIRAW
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgataataatgcttcgtagccctgttatgtctgcctcctccacgccgttctcagtcaag
gacatactgaagttggagcttcagcagcatgctcaacaacagcggctcgcctcacacctt
gggccgccccatgagcgctctcaccccgggccacagcagcacccttacaccctccagtcg
cccccgtcttgtatgctggccgatagggacagccccagccccgggctctcggaagaagag
gagaggatgtcctacctgagtagtctggcggttcaggagcagctgatggaaacgggtcta
gccggggagatgttcatttccccggggctgcagggacactcagccgacaccagcctggag
gttgagcaagaggacataaacgccaaatcttgtggcgcaatgggggtgagggcctgtgag
gagtccgcgcaggcgcactcggactcggagagactcccaaaacagcagaggacccggcgg
aaaccgcgcgtgctcttctcccaggcgcaggtgttcgagcttgagcggcgcttcaaacag
cagcgttacctgtccgcccccgagagggaacacatggcgaacactctgaaactgacctcc
acacaggtcaaaatctggttccagaacaggaggtataagtgtaaacggcagcgacaggac
aagaccctggagatggccggacaccctcaccatcctcccccacctaggagagtggcagta
ccggtgctggtgcgggatgggaagccctgcctggctggatctcagaactataatacatcc
tacactgttggagcggccagcccctttagttataacggctacccggcttatacttacaat
aatccggtgtatactaacacttactcatgcacgtactctagcctgcctgctctagcaccc
aactctactgctaacgcctttatgaacatgggtctggcgaacctgggcgcgtcgacatct
caggcccaaacaccgcagggaactggctgccaaggaactctgcagggcattcgagcctgg
tag
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