Coregonus clupeaformis (lake whitefish): 121547958
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Entry
121547958 CDS
T08357
Name
(RefSeq) TANK-binding kinase 1-binding protein 1-like
KO
K12652
TANK-binding kinase 1-binding protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
121547958
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Gene cluster
GFIT
Motif
Pfam:
TBD
Zn-C2H2_12
Fib_alpha
UPF0242
PKcGMP_CC
CT_C_D
Motif
Other DBs
NCBI-GeneID:
121547958
NCBI-ProteinID:
XP_045065633
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Position
31:22478245..22523571
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AA seq
646 aa
AA seq
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MESLFGGELRLLGGGEGLNEDSCGDVGWSSSSLPDDLYSVSHFTLITAYQDIKTRLAGLE
RENSGIKRKLKIYEIKFPMISEFGEDRNSYCSFESKETALLKSEKSNLQQRVNALTHELQ
KRKEREEQLEDVIQAYEKIHMEKNNLQRDLDKMTSLVEKHVEHIVDLESVLRQRDNSLQK
LNTQLHSKDIQYLQLHSPDNHMLDCPALTLQSSRSLDTLSDLKLQRLEAELEGARHEVQR
ACQREEEIKAKCERLQEELRQIQNNHIGREMTSPCEQCDVEWIKKVGDEQVNLALAYTEL
TEELGRLQALSSKQKEILRKVSQEQHSPVQRHSHPPSPIPHQRHSPVPQRHSPIPQRHSP
IPPQHHSPIAQCRSPVLQPQRLSPDMHRRSPLLDINDGPASYSCRPASHHLRASFQGRRS
YSEVADPSAYQRPPRFSLDPVSTLPKPRPYRDSGYSKQHQQHEHGGSQHGGSPHRGGQLR
ASQSGLERAGSEVGLHESSRHSRELPFPLSEVSPRSHLHFEPLPPPTPAPQLPQSSEDEE
EWTCPHPISPPRTLGVPNNVSAHGVMRGLASCSAFPIPSRPNTLTCHPPGYLHAEHAQSW
PSINLWMETEESDMRSCPLCQLIFPMGYPDDALIKHIDSHLENSKI
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggagtctctattcggtggtgagctgaggctgctgggaggtggcgagggcttgaatgag
gacagctgtggcgacgtgggctggtcctcctcgtccctccctgatgatttgtactccgtc
tcccacttcaccctcattaccgcctaccaggacatcaagacacggctggcgggcctggag
agagagaacagcggtatcaagaggaagctcaagatctacgagatcaagttccctatgatc
agtgagtttggggaggacaggaactcctactgcagctttgagtccaaggagacagctcta
ctaaagtcagagaagagcaacctgcagcagagagtcaacgccctcacccacgagctccag
aagaggaaagagcgtgaggagcagctggaggatgtgatccaggcctatgagaagatccac
atggagaagaacaacctccagagagacctggacaaaatgaccagtctagtggagaagcac
gtggagcatatcgtggatctggagtctgttctgagacagagagacaactcgctacagaag
ctcaacacccagctacacagcaaggacatccaatacctgcagctacacagcccagacaat
cacatgctggactgtcctgcgctgaccctgcagagctctcgtagtctagacactctgtca
gacctgaagctgcagcgtctggaggcggagctagagggggcgcggcatgaggtccagcgg
gcgtgtcagagggaagaggaaattaaggccaagtgtgagagactgcaggaggagctgaga
cagatccagaacaaccacatagggagggaaatgacttcgccgtgtgagcagtgtgatgtg
gagtggataaagaaggtgggagatgagcaggtgaatttggcgctagcctacacagagcta
actgaggagttgggacgtctccaggcactgagctccaaacagaaagagatcttgaggaag
gtctctcaggagcagcatagcccagtccaacgccactcccaccccccatctcccatccct
caccaacgccactctcctgtgccccagcgacactcccccattccccaacgccactccccc
atccctcctcagcaccactcccccattgctcagtgccgctccccggtgctccagccgcag
cgtctctccccggacatgcaccgccgctcgcccctgctggacatcaacgacgggcctgcc
tcctactcctgccggccagccagccaccacctgagggccagcttccagggccgacggagc
tactccgaggtggccgatccctcggcctaccagcggccgccgcgcttcagcctggaccct
gtgtccaccctgcccaagcctcggccctacagggactccggctactcaaagcagcatcag
cagcatgagcatggaggctcccagcatggagggtcaccccacagaggaggccagctgcga
gcttcccagtctgggctagagagggcaggcagcgaggtgggcctccacgaaagttcccgc
cactctcgagagctgcccttccccctgtccgaggtctctcccaggtctcacctgcacttt
gagcccctgccaccccccacgcccgccccccagcttccgcagtcctctgaagacgaggaa
gagtggacctgtccgcaccccatcagccccccacggacactgggcgtgcccaacaatgtg
tcagctcatggggtcatgagggggctggcgtcctgctcggccttccccatcccttccaga
cccaacactctgacctgccacccgccaggttacctgcatgcagagcacgcccagtcctgg
ccctccatcaatctgtggatggagacagaagagagtgacatgaggagctgccctctgtgc
cagctgatctttcccatgggttaccctgacgacgccctcatcaagcacatcgactcgcac
ctggagaacagcaagatctga
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