Coregonus clupeaformis (lake whitefish): 121548050
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Entry
121548050 CDS
T08357
Name
(RefSeq) RPE-retinal G protein-coupled receptor-like
KO
K04254
retinal G protein coupled receptor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121548050
04030 G protein-coupled receptors [BR:
cclu04030
]
121548050
Cilium and associated proteins [BR:
cclu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
121548050
G protein-coupled receptors [BR:
cclu04030
]
Rhodopsin family
Vision
Opsin
121548050
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
121548050
NCBI-ProteinID:
XP_041715382
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All DBs
Position
31:complement(44853793..44860301)
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AA seq
296 aa
AA seq
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MAAYTLPEGFSDFDMFAFGSALLVGGLLGFFLNAISILAYISVKEMRTPSNFLVFNLAVA
DIMLNTTGLIAAFASLSYRHWPWGQDGCSNHAFMGMTAVLASVSFLATIAWDRYHQYVTN
QKLFWSTAWTFSIVIWGMAIFWAAVPLTGWGVYDFEPMRTCCTLDYTKGDKDYMTYMGAL
TVFYLIFPAYVMKSNYDAIHAYFKKIHKHRWNTSVPLRVLLFCWGPYEIMCIYACFANAK
LVSPKLRMLLPVLAKMNPIFNAWLYSFGNEFYRGGVWQFLTGQKFTEPVVVKLKGR
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatacacattaccggagggattctccgattttgacatgtttgcattcggttca
gctcttcttgttgggggtcttcttggattcttcctcaacgccatttcgatattggcatat
attagtgtaaaggaaatgcgaactcccagtaatttccttgtctttaaccttgctgtggct
gacattatgctcaatacaactggcctgatcgctgcattcgccagcttatcttatagacac
tggccctggggccaagacggatgtagcaaccacgccttcatgggaatgacagcagtcctg
gcctctgtcagcttcctggctaccatcgcctgggacagatatcaccaatatgtcaccaat
cagaagctgttttggagcacagcctggactttttctatcgttatctgggggatggccatc
ttctgggcggccgtccctctgactggttggggagtttatgactttgagcccatgaggacc
tgctgcactctagactacaccaaaggagacaaggactacatgacctatatgggggcactg
actgtcttctaccttatcttccctgcttatgtcatgaagtccaactacgacgccattcac
gcatacttcaagaagatccacaagcacaggtggaacaccagtgtaccactgagagttctg
ttgttctgctggggaccctatgaaatcatgtgtatctacgcctgcttcgcaaacgccaaa
ctggtctctccaaagctgagaatgttgcttccagttttggcgaaaatgaaccctattttc
aacgcgtggctctattcctttgggaacgagttctacagaggaggggtgtggcagttcctg
actggtcagaagtttacagagcccgtcgttgtgaagttaaaaggaagataa
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