KEGG   Coregonus clupeaformis (lake whitefish): 121548168
Entry
121548168         CDS       T08357                                 
Symbol
itga11a
Name
(RefSeq) integrin alpha-11a isoform X1
  KO
K06587  integrin alpha 11
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04510  Focal adhesion
cclu04512  ECM-receptor interaction
cclu04810  Regulation of actin cytoskeleton
cclu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    121548168 (itga11a)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    121548168 (itga11a)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    121548168 (itga11a)
   04810 Regulation of actin cytoskeleton
    121548168 (itga11a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cclu04515]
    121548168 (itga11a)
Cell adhesion molecules [BR:cclu04515]
 Integrins
  Integrin alpha subunits
   121548168 (itga11a)
SSDB
Motif
Pfam: VWA FG-GAP Integrin_A_Ig_2 Integrin_A_Ig_1 VWA_2 FG-GAP_3 Integrin_A_Ig_3 FG-GAP_2 VWA_CoxE Ku_N DUF1737
Other DBs
NCBI-GeneID: 121548168
NCBI-ProteinID: XP_045065915
LinkDB
Position
32:complement(1938985..2013537)
AA seq 1192 aa
MEYYHVVFLWISCSLLPGLHDGFNIDTKNYRIIKGPKQAQFGYTVQQHVAGGQKWLLVGA
PYETNGHHQTGDVYKCPLGKRSNGSCSKLNLGRISLTNVAERKDKMRLGMTLTTNPKDNS
FVACGPLWSYECGSSYYSTGICSRVNASFKFSKTIAPAFQRCETYMDIVIVLDGSNSIYP
WTEVQSFLINILQKFYIGPGQIQVGVVQYGEKVVHEFHLNDYKSVEEVVKRASNIHQRGG
EETNTALGINVARSEAFKRGARRGAKKVMIVITDGESHDSPDLQQAIEDSEKDGITRYAI
AVLGYYNRRGINPEAFLNEIKYIASDPDDKHFFKVTDESALKDIVDALGDRIFSLEGTNK
NGTAFGLQMSQAGFSSHFVEDGILVGAPGAYDWNGAVLKETRQGKVVPLKSSYSQEFPEE
LKNHGAYLGYTVTSVVSARNGRLYVAGAPRFNHTGKVIIFTLKNTGNLTILHSLKGQQIG
SYYGSEISPVDIDGDGVTDNLLVAAPMFFSGGWEKGKVYIYRVTELNRFILEGALEIQDR
GQNARFGSSLAPVPDLNGDGFNDVVVGAPLEDDHRGAIYVFFSQRNRILRKYKQRIAALD
MASGLRYFGRSIHGNMDMDEDGLVDLAVGSLGAAVLLWSRSVVRIHANIRFEPSKINIFV
KDCERGGKEVTCMSAIVCLNVTARTAIPPTQGVAITYNTTIGERRFNPRAIMDDPDKLLF
QNLTLLSGEETCQHIYFHVMETTDYVRPIVFTVEVALKDPNQGPTLDDTWPTTVRTELPF
WNGCDEDDRCIPDLSLQSTTDLLSWRQFCGNAVHSRGAMCRRLSEGGAEGSERVMEGSRR
RMVMDVRLENRGENAYGAHLNITYTPNLRFSSLIVKDNSDIKIECRSEDRQRHERTCNVS
APFMRAKTQVSFRLEFEFSRSVFLDHVRVILEASSDGEEVTLADNFNDIFHPLKYEADLL
FTRDSNPSRCEIKADLSLEVPGNIGPPFNFTFQIQNLGFFPVRDLQLNIEIPEMTKNGNQ
LLQISDFNIDQTDGTRCIPPQHVAQSRASPEDLSRVSRLNHSNTLPLPVQCTVNLNPYRE
VSVRIRGALRLDALHALRFKVLELVTSASVELPPSSPMFLHEERPVRHIILEIRKEGDYR
ISIWIIIGSTLGGLLLLSLLSLALWKLGFFQRQKRREEDEQETNGKEEAEER
NT seq 3579 nt   +upstreamnt  +downstreamnt
atggagtactaccacgttgtgtttctctggatctcttgcagcctgctgccagggctccat
gacggtttcaacatcgacaccaagaactacaggatcatcaagggtcccaagcaggcccag
tttggatacaccgtgcagcagcacgttgctgggggacagaagtggttattggtgggagct
ccatatgaaaccaatggtcaccaccagacaggggatgtgtacaaatgcccattgggcaaa
cggtccaacggcagctgttccaaactcaacctaggaaggatatctctaaccaatgtcgcc
gagcgaaaagacaagatgaggctggggatgaccctgacaaccaaccccaaagacaacagc
tttgtggcctgtggacccctatggtcctatgagtgtggcagctcatactacagcactggg
atatgctcccgggtcaacgccagcttcaaattctccaaaaccatagctccagccttccag
aggtgcgagacctacatggacatagtgattgttctggatggttccaactccatctacccc
tggacggaggtgcaatcctttcttatcaacattctacagaagttctacatcggaccaggc
cagatacaggttggagtggtgcagtatggggagaaggtggtgcacgagttccatctgaat
gactacaagtcagtggaggaggtggtgaagagagcaagcaacatccaccagcgaggcgga
gaggagaccaacacggcactcggcatcaacgtcgctcgctcagaagcattcaagcgagga
gcccgacgaggcgccaagaaggtgatgatcgtgataactgacggggagtcacatgacagc
cctgaccttcagcaggccattgaggacagcgagaaggatggcatcacccgctacgccatc
gctgtgcttggctactacaaccggcgtggaatcaacccagaggcattcctgaatgaaatc
aagtatatcgccagtgaccccgatgacaagcacttcttcaaggtgactgacgagtctgcc
ttgaaggacattgtggatgcgcttggggataggatcttcagtttggaagggaccaataag
aacgggacggcctttggcctccagatgtcccaggctggcttctcttcacactttgtggag
gatgggatcctggtgggggcaccgggggcctacgactggaatggagctgtcctgaaggag
acccgacaggggaaggtggtcccactcaagtcctcctactcacaggaattcccagaggag
ctgaagaaccatggtgcctacctaggttacacagtaacatcagtggtgtcggccaggaac
ggtcgactgtacgtggccggggcaccgcggttcaaccatactggcaaggtcatcatcttc
accctgaagaacactggtaacctcaccatcctgcactccctcaaaggacaacagattggg
tcgtactatgggagtgagatctccccggtggatatagatggggacggagtgacagacaac
ctcctggtggcagcgcccatgttcttcagtggaggctgggagaagggcaaggtgtacatc
tatagagtgactgagctgaatcgtttcatcctggagggagcgctggagatccaggaccgt
ggtcagaacgctcggttcggctcctcgctggccccggtccctgacctgaacggggacggc
ttcaacgacgtggtggtgggggccccactggaggatgaccatagaggagctatctacgtc
ttcttcagccaacgcaacaggattctacgtaaatacaaacagaggatagctgcgttagac
atggccagtggcctgcgctactttggccgtagtatccatggcaatatggacatggacgag
gatggcctggtggacttggcagtgggctccctgggggcagccgtgcttctatggtctcgc
agtgtcgtccgaattcacgccaacatcaggtttgaaccgagcaagatcaacatctttgtg
aaggactgtgagaggggaggcaaggaagtgacctgcatgtcagccatagtgtgtctaaac
gtcaccgcccggacagccatacctcctacacagggagtggctattacatacaacaccacc
attggggagcgccgattcaaccccagagccataatggacgaccctgacaaactgctgttt
caaaacctgaccctgctttctggagaggagacctgtcaacacatctacttccatgtcatg
gagaccacggactacgtgaggcccatcgtgttcactgtggaggtggcacttaaggatccc
aaccagggccctacgctggacgacacctggcccaccaccgtcaggactgagctccccttc
tggaatggttgtgatgaggacgaccgctgcataccagacctgtccttacagagtacaact
gacctgctgtcttggaggcagttctgtgggaatgcagtccactccaggggtgcgatgtgt
cggcgtctgtccgaaggaggggcggaggggtcagagcgagtgatggagggatcgaggagg
aggatggtgatggacgttcgtctggagaacaggggagagaacgcttacggcgcccacctc
aacatcacctacactcctaacctacgattctctagtctcatagtcaaggacaactcggat
atcaagatagagtgtcgcagtgaggacagacagaggcatgagaggacctgcaacgtcagc
gctcccttcatgagagccaagactcaggtatctttccgtctggagtttgagttcagccga
tcagtgttcctggaccacgtacgagtcattctagaagccagcagtgatggagaggaggtt
accttagcagacaatttcaacgacatctttcacccgctgaaatacgaggctgacctccta
tttacaagggactccaacccctctcgctgtgaaatcaaagcagacctctcgctggaggta
ccgggaaatattggccctccattcaacttcaccttccagatccagaatctgggcttcttt
ccggtgagggacctgcagttgaatatagaaattccagagatgaccaaaaacgggaaccag
ctgttgcagatatcggacttcaatattgaccagacagacggtacccgctgcataccccct
caacatgtggcacagagcagggcgtccccagaagacctctctcgagtctcacgcctgaac
cactccaatactctgcctctgccggtccaatgcactgtcaacctgaacccctacagggaa
gtcagcgtcagaatcaggggggcattacggttggacgccttgcatgctctgaggttcaaa
gtcctggaactggtgacgagcgcatcagtagaacttccaccttcaagccccatgtttctt
catgaagaaaggcctgtcagacatataatcctggagattaggaaagaaggggattacaga
atctcaatctggattatcattgggagcacgctgggagggttgttgctgctatccctgctc
agtctagctctatggaagcttggcttcttccagaggcagaagaggagagaagaggatgag
caggagaccaatggaaaggaggaggcggaggagcggtaa

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