Coregonus clupeaformis (lake whitefish): 121548214
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Entry
121548214 CDS
T08357
Symbol
pax6b
Name
(RefSeq) paired box protein Pax-6b isoform X1
KO
K08031
paired box protein 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121548214 (pax6b)
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
121548214 (pax6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
Homeobox_KN
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
121548214
NCBI-ProteinID:
XP_041715532
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MPQKEYHSQATWESGVASMMQNKVYDICDEGHSGVNQLGGVFVNGRPLPDTTRQKIVELA
HSGARPCDISRILQTHDDSKVQVLENENVSNGCVSKILGRYYETGSIRPRAIGGSKPRVA
TPEVVGKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSAVSVSSINRVLRNLASEK
QQMGADGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPNQDGCQPQDGAGENTNSISSNG
EDSDETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARI
QVWFSNRRAKWRREEKLRNQRRQASNSSSHIPISSSFSTSVYQTMPQPTTPVSFTSGSML
GRPDTALTNTYSALPPMPSFTMSNNLPMQPSQTYSCMLPTSPPVNGRSYDTYTPPHMQAH
MNSQSMTTSGTTSTGLISPGVSVPVQVPGGEPDMSQYWSRLQ
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaaaaagaataccacagccaagccacgtgggagtctggcgtagcctcgatgatg
cagaacaaggtctatgacatctgtgatgaaggtcacagcggtgtgaaccagctgggcggt
gtgtttgttaacggtagaccgctaccggacaccaccaggcagaaaatcgtcgaacttgct
catagtggcgcgcggccgtgcgacatctccaggattctgcagacccatgatgactcaaaa
gtccaagtgctggaaaatgaaaacgtgtccaacgggtgcgtgagtaagatccttggcaga
tactatgagactggctccattagaccgagagcgatcggaggcagcaaaccgagggtagcc
actccagaggtggtggggaagatagcgcagtacaagcgggagtgcccgtctattttcgcc
tgggagatccgcgacagactgttgtcggagggggtctgcaccaacgacaatatacccagt
gtaagtgcagtgagtgtgtcatcgataaacagagtcctccgcaacctggctagcgagaag
caacagatgggcgcagatggcatgtatgacaagctgagaatgctcaacggtcagacagga
acttgggggacacggcccggatggtaccccggaacttcagtcccagggcagcccaaccaa
gacggttgccagccacaggacggtgcaggagagaacaccaactccatcagttcgaatggg
gaggattcagacgagacgcagatgagacttcagctaaagagaaagctacagagaaaccgc
acgtcgttcacccaagagcagattgaagcactggaaaaagaatttgaaaggactcattat
cctgacgttttcgcgagggaaagactggcagcgaaaatagatctgcctgaagcaagaata
caggtgtggttctcaaacagaagggcgaagtggaggcgggaggagaagctccggaaccag
cgtcgtcaggccagcaactcctccagtcacatccccatcagcagcagcttcagcaccagc
gtctaccagaccatgcctcagcccaccacacctgtgtccttcacatctgggtctatgttg
ggcagacctgacacggccctcaccaacacatacagcgcactgcctcccatgcccagcttt
accatgtccaacaacctgcctatgcaacccagccagacctattcctgcatgctgcctacc
agtccgcctgtgaatgggcggagctacgacacatacacgccccctcatatgcaggcacat
atgaacagccaatcaatgaccacttctggtaccacctcaacaggactcatctctcctgga
gtgtctgtccctgtccaggtcccaggcggcgagcctgacatgtctcagtactggtcaaga
ctacaatag
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