Coregonus clupeaformis (lake whitefish): 121548233
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Entry
121548233 CDS
T08357
Symbol
cpeb1b
Name
(RefSeq) cytoplasmic polyadenylation element-binding protein 1 isoform X1
KO
K02602
cytoplasmic polyadenylation element-binding protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04114
Oocyte meiosis
cclu04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
121548233 (cpeb1b)
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
121548233 (cpeb1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121548233 (cpeb1b)
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
121548233 (cpeb1b)
Factors involved in mRNA localization
Trans-acting binding proteins
121548233 (cpeb1b)
mRNA cycle factors
P-body specific factors
121548233 (cpeb1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CEBP1_N
RRM_7
CEBP_ZZ
RRM_1
ANCHR-like_BBOX
DUF8843
Motif
Other DBs
NCBI-GeneID:
121548233
NCBI-ProteinID:
XP_041715570
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All DBs
Position
15:complement(63876483..63888007)
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AA seq
587 aa
AA seq
DB search
MAFSLKDEFRPHDNWAPESPALSTCSNADIYRRMNTMLGNSLDFTGVCTTSGTKGKLDML
LTDLQESELAAVGSRMLFPSSSVGGSGGSPHEGSSRGLPDVNDLGLGLQSLSLSGWERPW
SSHDTDAHTTAASQAHTSSTSMLDMLGSPLGQILGKPLGYHPPSEPMGTAADFLEKFPGM
ARMTSRLDSRSFLDSRSSSPVDSETSGFSSGSDHLSDLLSSLRISPPLPFLMSSMQKDSM
RLSSLGSRLDYQDHGSPLTPPPSATSSATALSRRWPGASIWPSLDLLDTPDDPFSIEREA
RLHRQAAAVNEATFTWSGQLPPRNNKNPLYSYKVFLGGVPWDITEAGLINTFSGYGPLSV
EWPGKDGKHPRCPPKGNMPKGYVYLVFENEKSVRALLHACTQDLLHPEENGEYYFKMSSR
RMRCKDVQVIPWVISDSNYVRCPSQRLDPSKTVFVGALHGMLNAEALASIMNDLFGGVMY
AGIDTDKHKYPIGSGRVTFNNQRSYLKAVCAAFVEIKTPKFTKKVQIDPYLEDSMCQVCS
RQPGPFFCRDQACFKYYCRSCWHWQHSMDLLSNHRPLMRNQKNRDSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggcgttttcattgaaagacgaatttagaccccatgacaattgggcacccgaatcacca
gccttgtccacttgcagtaacgcggacatatatcgtagaatgaacaccatgttgggcaac
tctctggattttactggtgtgtgcacaacatccggcaccaagggaaagctagacatgctc
ctgaccgacctgcaggaatcggagctggctgcagtgggcagcaggatgctcttccccagc
agcagtgtcggtggcagcggaggctctccccacgagggctcctccagaggcctgccagat
gtcaacgacctgggtctgggcctccagtccctcagcctgtccggctgggagcgcccctgg
agcagccatgacacggacgcacacaccaccgctgcttcccaggcccacaccagctctacc
tccatgctggacatgctgggcagtcccctgggccagatcctgggcaagccccttggctac
cacccccccagcgagcccatgggcacggcagctgacttcctggaaaagttccccggcatg
gcgcgcatgaccagccgtctggactctcgctccttcctggactcgcgctccagcagccct
gtagactctgaaaccagtggcttcagctccggctcggaccacctctcagacctgctctcc
tccctgaggatctctccccccctacctttcctcatgtccagcatgcagaaggactctatg
aggctgagctctctgggctccaggctggactaccaggaccacggctcccctctcacccca
ccgcccagcgccaccagctctgctacggccctgtcccgccgctggcccggggcatcaata
tggccaagcctggacctgctggatactcccgacgaccccttcagcatcgagagggaggcc
cgcctgcacaggcaggcggctgctgtaaatgaagccaccttcacctggagtggacagctg
cctccccgcaacaacaagaaccctctgtactcctacaaggtcttcctgggtggagtaccc
tgggatatcactgaagctggtctgatcaacactttcagtggctacggccctctgagtgtg
gagtggcccggtaaggatggcaagcatcctcgctgccctcccaaaggtaatatgcccaaa
ggctacgtttaccttgtgtttgagaacgagaagtctgttcgtgcactgctccatgcctgc
acccaggacctgctccaccctgaggagaacggagaatactacttcaagatgtctagccgc
aggatgcgctgcaaggatgtgcaggtgattccctgggtgatctcggacagtaactacgtg
cgctgcccctcccagcgcctggaccccagcaagactgtgtttgtgggcgctttgcacggc
atgctcaacgcagaggccctggccagcatcatgaatgacctgtttggcggagtgatgtat
gctgggattgacaccgacaagcacaagtacccgatagggtctgggcgtgtcaccttcaac
aatcagcgcagttacctgaaggctgtgtgtgcagcgtttgtggagatcaaaacccccaag
tttacaaagaaggttcagattgacccctacctggaggactccatgtgccaagtgtgcagt
cgccaacccgggccgttcttctgcagggaccaggcctgcttcaagtactactgtcgctcc
tgctggcactggcagcactccatggacctcctgagcaaccaccggcccctgatgcgcaac
cagaagaacagggactccagctag
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