Coregonus clupeaformis (lake whitefish): 121548349
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Entry
121548349 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat serine/threonine-protein kinase 1
KO
K08843
leucine-rich repeat kinase 1 [EC:
2.7.11.1
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cclu01001
]
121548349
Enzymes [BR:
cclu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
121548349
Protein kinases [BR:
cclu01001
]
Serine/threonine kinases: TKL group
LRRK family
121548349
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
LRR_8
LRR_4
COR
Roc
Ank_2
LRR_14
Ank
Ank_3
Ras
Ank_4
Arf
Gtr1_RagA
LRR_9
Motif
Other DBs
NCBI-GeneID:
121548349
NCBI-ProteinID:
XP_045080929
LinkDB
All DBs
Position
15:complement(15017141..15108720)
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AA seq
2047 aa
AA seq
DB search
MSYWSVGLSKATGDTQSNNMEDQEKQDGEQDGSLAVEDMGAKVSAMGSGGASSLGPSPTL
ENIQAAYGEGEGRKARELIQQACCVECSAASPRLEGLRLLCVATQHGDAESVSYLLHEAR
VPLPLEPSEGNPAVLAAHYGHVSLVRELLDSVPGPCVHRDLLNWMLVSACQQGHLEVVRM
LVQGYHADAEDCAIHNEEFAVITGLPLYAAARAGNEDIASFLLQNGAGFSSYTLMDYPAF
SRLLLEQRLVEEADTHTGPAGEKLLCGRWSGLKLPWLELDWFMDVSSRISHLDLSCNSLS
TLPSVVPWGLIQLQTLDLSNNLFKELPTAQSSQEIICSRLRQVNLSQNELTSLPSGLLHL
TRVQKLSAVKNKLTSLFDIPNGTNWIGXRKLEELDVSDNCLTSLPSAVLHSFKSLTSLKV
CRNRLTSFPDPWACPLKHCRASSNAIESLPNTISIFWRTQLQEVDFSDNVIKELPSYIFE
LEALVSLRLCKNQISTLPAPNKWKCSLLRTLDLSRNQLGKPEEGPKTRKLAFLTTWHRRD
PDPVCPIEFPVILRDTLEVLSLNDNQLECVPQSVCGLRNLTELYLSNNPGIRELPAELGQ
LSNLWQLDIEDLNITNVPQDIRKEGPASVLSFLRAHLRKAEPCKLLKLLVIGPPRQGKTA
LLEVLQTGRTSPFSPAERNISTATWELDRPNGVKASTDSVAFNVWDIGGPANMSTVNQCF
FTDKALYVVIWNLALGEEAVANLQSWLLNIEARAPNSAVVVVGTHLDLIDTKFRTERVAT
LRAYILALSRSPSGARASGYPDITWKHLHEVSCKTQEGLDGLRRLIFQVACYMKDNSSSS
ASGHKLVGRLIPKSYLTLQQAVLGERGRRDAEDEVQYLTDAQLDLVIEQNPGSDIRDYED
LQTAISFLIETGTLLHFPDTSHGLCTLYFLCPVWLSECLERIIHLKSSRSVAWNGVIRAE
DLRMLLVGTGFTQQTEEQYFQFLAKFEIALPVASDSYLLPHLLPPKPAMDIHGFRQETAN
TIQRLFKMSFVPAGFWERFIARMLISLTEMDLQSFEPKKNAKSERRRTTVIYNFAGTGSQ
QRNRCSTFRVRRSKTIYWREGLLVTFDGGYLSVESTDVNWKRKKSGGIKIICQSETRDFS
AMAFVTDHVNSLIEQWFPALTASESDGTRLIEQYSPCPQCSSMSRQNQGPGSREKVGGRG
EHFFNMEDCVIAAMDQDYIVCPQHPDQPVPLQELVPELFMTDFPSRLFLEKAQLECSEEE
SDILGQGGSGAVIYRACYRGQPVAIKRFHFKKCRQQTISSADTMMKHFQSMDACRSFSEF
RQEASMLHSLQHPCIVALVGISIHPLCFALQLAPLGSLNTVLEDRHKGSRYMPLGHXLTF
RAAYQIATGLAYLHRKNIIFCDLKSDNILVWSLEVCDLVNIKLSDYGISRQSFHQGALGV
EGTPGYQXPEIRPGIVYDEKVDMFSYGMVVYELLSGCRPALGQHQLQIAKKLSKGIRPAL
GSPGSPVPLSAGLMIECWDTKPEKRPLAMQCVRQMQEPSFPCLRYLLSCDTHSQLFLSHL
QGHSAVFWDGDKDDRNYSVVNVEKGQVEXEEDAVSGSRLSCQMKMDNTLWTPQRLQEVFI
YSLKEMCPLSQPQKQLSCPAIVTCLFPVPARDQTQARVFMGMSDGLVAVYSLVDDMPVEG
ETYLCSHTLNTTMFGMEDSDPRQRPYPVRSMVLVHSGSQLWYSHGPGLLVINCRTLQAVR
RLDPYDPPSSIQALASSLCLSGDEAVWTLDDHTNTLQLYHAATYQLCATYSCGDANPLRD
VFTVQRPAGVTMDTTPDLDSKRKGLEEEEEECPNGEVTLIYSAEAGTQIIQHQDSLTDYC
SMSSDSTPSMGFDQSCSGPSSEPLGLDRSSSYALSSLASSSSMPFSTEEEERPQDHPANP
DPVVNSDPTTTFSPTSPHLQALTVLAVNGTLWIPRSGGDVMVIEVQRQTGQLRGRVIAVL
RPPGTSSYGTLEEAALVAKDTVVCGFRNENRAWCLCVWRGWGPRELELFYQSYEDLGRLE
TSMRKRR
NT seq
6144 nt
NT seq
+upstream
nt +downstream
nt
atgtcctactggtctgtaggcctctccaaggccactggagacacacagagcaacaacatg
gaggaccaagagaaacaagatggtgaacaagatggttctttggcggtggaggacatggga
gccaaggtgtctgcgatgggcagcggtggagcctcctctctgggtccgtctccaaccctg
gagaacatccaggcagcgtacggggaaggggagggcaggaaggcccgggagctgatccag
caagcctgctgtgtggagtgtagcgcggctagtcctcggctggaggggctgcgtctcctg
tgtgtggccacccagcatggtgatgcggagagtgtaagttacctcctccatgaggcccgt
gtgcccctgcccctggagccgtcggagggaaaccccgccgtccttgctgcccactatgga
catgtcagcctggtcagagagctgctcgactcagtaccaggtccgtgtgtccacagagat
ctgctgaactggatgttggtgtcggcgtgccaacagggtcacctggaggtggttagaatg
ttggtgcagggttaccatgctgacgctgaggactgtgccatccacaacgaggagtttgct
gtcatcacggggctgcctctctatgctgctgcacgcgcaggtaatgaggacatagctagt
ttcctgctgcagaatggtgctgggttctcctcctacaccctgatggattatcctgccttc
agcagactgctccttgaacaacgactggtagaagaagcagacacacacacaggaccagca
ggagaaaagctactatgtggccgttggtcaggtctgaagctgccgtggttggagctggac
tggttcatggacgtgtcgtcccgtatctcccacctggacctgtcctgtaacagcctcagc
accctgccctccgtggttccctgggggctcatacagctccagaccctagacctctccaac
aacctgttcaaagagctgcccacagcacaaagctcacaggagatcatctgctcaagactt
cgccaggtgaatctgtctcagaatgagttgaccagcctgccgtccggactgctccatctc
accagagtccaaaagctctccgctgttaagaacaagctcacctccctatttgacattcct
aatggtactaactggataggtnctcgtaagctggaggagctggatgtgtctgataactgt
ctgaccagtcttccttctgctgttctgcactctttcaaatcccttacgtccctcaaagtc
tgccggaacagactcaccagcttccctgacccctgggcctgccctctgaagcactgtcga
gcctcatccaacgccatcgagagtcttcccaataccatctccatcttctggagaactcag
ctgcaggaggtggatttctcggacaacgtcatcaaggagctgccctcctatatattcgag
ctggaggccctggtctctctcagactgtgtaagaatcagatctccactctcccggcaccc
aacaagtggaaatgctctctgctcagaacccttgacctctccaggaaccagctgggcaag
cctgaggagggacccaaaaccaggaagctggccttcctgaccacatggcaccgaagagac
cctgacccagtatgcccaatcgagtttccagtaattttgcgggatacgttggaagtgctt
tccttgaacgacaaccagctggagtgtgtgccccagtccgtgtgtggcctgagaaacctc
acggagctctacctctccaataatccaggtattcgagagcttccagctgagttggggcag
ctctctaacctgtggcagttggacattgaggacctcaacatcactaatgttccccaggac
atcaggaaagaaggtccagcatcagtgttgtcctttctccgagcccacctacggaaggcg
gagccctgtaagctgctgaagctgcttgtgattggtcctcctcggcagggaaagacggcc
ctcctggaggtgttacagacgggcaggacctcccctttctcccctgcagaacgaaacatc
agcacagctacttgggaactggacagacccaatggtgttaaagctagcacggactctgtg
gcgttcaacgtgtgggacatcggcggtccggccaacatgtccacggtcaaccagtgtttc
ttcacggacaaggccctgtacgtagtcatctggaacctagctctgggagaggaggctgta
gccaatctgcagtcctggctgcttaacattgaggcgcgtgcccctaactctgcggtggtg
gtggtgggtacccacctggacctgatcgacaccaagttccgtacagagcgggtggccaca
ctgagggcctacatcctggcactcagcaggtctccatcaggcgccagggccagtggctac
ccagacatcacctggaaacacctgcatgaggtatcgtgtaagacccaggagggtctggat
ggtctgaggaggttgatcttccaggtggcctgctacatgaaggacaacagcagtagttca
gctagcggacacaagctggtgggcagactgatcccaaagagctacctgacgctgcaacaa
gcggtgctaggtgagcgggggcggcgggacgcagaagacgaggtccagtacctgacagac
gcacagctggacctcgtcatagagcagaacccaggaagtgacatcagagactacgaggac
ctgcagaccgccataagcttcctgatcgagacaggcaccctactccacttcccagacacc
agtcacggcctgtgtaccctctacttcctctgtcccgtgtggctgtcggagtgtctggag
cggatcatccacctgaagagctcccgatcggtggcctggaacggggtgatccgagcggag
gacctccgcatgctcctggtgggaacgggcttcacccagcagacggaggagcagtacttc
cagtttctggccaagtttgagattgctctgcctgtggccagcgatagttacctcctcccc
cacctccttcctcctaaacctgctatggacatccacggcttccgccaagagaccgccaac
accatccagcggctcttcaagatgagcttcgtgccggcgggattctgggaacgtttcatc
gcccgcatgctcatcagcctcacagagatggacctccagtcctttgagcctaagaagaat
gctaagagcgaacggaggaggaccacggtgatctacaattttgcggggacaggcagccaa
cagaggaaccgctgtagcaccttcagagtccgccgcagtaagaccatctactggagagag
ggactactggtcaccttcgacggagggtatctaagtgtggaatcgactgatgtcaactgg
aagaggaagaaaagcggaggcatcaagatcatttgtcaatcagagaccagggatttttca
gccatggccttcgttacggatcacgtcaactccctcatcgaacagtggttccctgcactg
acggccagtgagagtgatgggacccggttgattgagcagtactccccctgtccccagtgt
tcctccatgagcagacagaaccaggggcctgggagcagagaaaaggttggtggaagagga
gagcacttcttcaacatggaggactgtgtgatcgctgccatggaccaggactacatagtg
tgtccccagcaccccgaccagcctgtcccccttcaggagctggtcccagagcttttcatg
accgacttcccctcacggttgtttctagagaaggcccagttggagtgtagtgaggaggag
agtgatatcctgggccaggggggcagtggagctgtcatctacagagcctgttaccgcggc
caaccagtcgccatcaaacgctttcacttcaagaagtgcaggcagcagaccatcagcagt
gcagacaccatgatgaagcacttccagtccatggacgcgtgccggagcttctcagagttc
cgccaggaggctagcatgctccactccctgcagcacccgtgcatcgtggccctggtggga
atcagtatccacccgctctgcttcgccctgcagctggctcccctgggcagcctcaacact
gtgctggaggaccgacataaaggctccaggtacatgcccctgggtcatnngctcaccttc
agggcagcctatcagatcgcaacggggctggcctacctgcacaggaagaacataatcttc
tgtgacctcaagtcagacaacatcctggtgtggtccctggaggtgtgtgacctggtgaat
atcaagctgtcggactacggcatctcgcgccagtccttccaccagggggcactgggggtg
gagggcacgccgggataccagngccccgagatacgcccaggcatcgtttatgatgagaag
gtggatatgttctcgtatgggatggttgtgtatgagttgctgtcaggttgtaggcctgcg
ttgggccagcaccagctccagatagctaagaagctgtctaaagggatccgtccggccctg
gggagcccaggaagtccagttccactgtctgccggcctgatgatcgagtgctgggacact
aagcctgagaagagacccctggccatgcagtgtgtgaggcagatgcaggagcccagtttc
ccgtgtctgaggtacctgctgtcctgtgacacacactcccagctcttcctgtcccacctg
cagggacacagcgctgtcttctgggacggggacaaggacgacaggaactacagtgtggtg
aacgtagagaagggtcaggtagagnntgaagaggatgccgtgtccggatccaggctgagc
tgtcagatgaagatggacaacaccttatggaccccacagaggttgcaggaagtgttcatc
tacagtctaaaggagatgtgtccactgagccagccccagaaacagctctcctgtcctgct
atagtcacctgtctgttccccgtgcccgccagagaccagacccaggcgcgtgtcttcatg
gggatgtcagacggtctggtggcagtgtactccctggtggatgacatgcctgtagaagga
gagacctatctgtgttctcacaccctcaatacgaccatgtttgggatggaggactctgac
ccaagacagagaccctacccagtcaggagcatggtcctggtccacagtggctcccagctg
tggtactcccatggtccaggcctgctggtgatcaactgccggaccctccaggcggtgcgt
cgtctggacccctacgaccccccatcctccatacaggccctggcctccagcctctgtctg
tcaggggatgaggcagtgtggaccctggacgaccacaccaacaccctacagctctaccac
gctgccacctaccagctctgtgccacgtacagctgtggcgacgccaaccctctccgggac
gtgttcactgtacagcgacctgcaggggttaccatggatacgacccctgaccttgactca
aagaggaagggtctagaggaggaggaggaggagtgtcctaacggcgaagtgacgctgatc
tacagcgcggaggcagggactcagatcatccagcaccaggattcgctgacggactactgc
tccatgtcctctgactccaccccttcgatgggatttgaccaatcctgttccggcccctcg
tcagagccgctgggattggaccgatccagttcctacgctctcagctcattagctagttcc
agcagtatgcctttttccactgaggaggaagagaggcctcaggaccacccagccaaccct
gaccctgtggtgaactctgaccccaccacgacctttagccccacgtccccccacctgcag
gccctaactgtgctggctgtcaatggaaccctttggatccccaggagtggtggtgacgtg
atggtgatcgaggtccagcggcagacaggacagctcagggggcgtgtcatcgctgtgctc
aggccccctggaacttcctcttacgggaccctggaggaggccgcactagtggcaaaggac
actgttgtgtgtggctttcgcaacgaaaacagggcctggtgcctgtgtgtctggcggggc
tggggcccccgagagctggagctcttctaccagtcctacgaggatctggggaggctggag
actagtatgaggaaaagaaggtag
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