Coregonus clupeaformis (lake whitefish): 121548388
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Entry
121548388 CDS
T08357
Symbol
piezo1
Name
(RefSeq) LOW QUALITY PROTEIN: piezo-type mechanosensitive ion channel component 1
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121548388 (piezo1)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121548388 (piezo1)
Membrane trafficking [BR:
cclu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
121548388 (piezo1)
Ion channels [BR:
cclu04040
]
Other channels
Mechanosensitive channel (Piezo)
121548388 (piezo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_TM1-24
Piezo_TM25-28
Piezo_THU9_anchor
Piezo_cap
THU_Piezo1
FAM210A-B_dom
Motif
Other DBs
NCBI-GeneID:
121548388
NCBI-ProteinID:
XP_045081392
LinkDB
All DBs
Position
15:58838834..58908511
Genome browser
AA seq
2524 aa
AA seq
DB search
MELQVVCGLLYCFLLPTFLLAACLFRYNGLSLVYLLYLLLLPWFLWPNKHTLRGHTGRFI
KALFCTSLLFLLAHVSFQICLYTIPDLDHALGHNCSLWETLSRHVGVSRLPLDDVWSVVH
LLTPDLGVFVISLVTLVVCNRLVKKRDDVTVLPVASDSTQGTEDGSETKEGEEEEEEEEG
DEEGMSSPSDPGMPVSAATRAKQLAARLRATAQKVLRDLGRILAITLLALAGITLPSAFS
AIYFLLFIGVCTWWACHFPISHLGFNVLCVMVGFFTAGHLVCLYLYQCPIAQGILPPASL
WARLFGLKDIVKPGNCSASYDLIFNTEHDWPVYVNPGILLLLYITMAMVLKISSHHRSAD
KGEEGAQLVKGTEAGGGEEVELKPWSAQRRPSQDDTEHMLLSIGESMESTGDGVTNGSSH
QDLGPGLSSAPDGQHGDHPLHLLGRVVMQQSYVCALIAMMVWSITYHSWLTFVLLLWACL
IWMMRARRHFATLCSPFILLYGLALCFLQYVWAMELQPELPRTVGTMSLRQLGLDRAQYP
CLRLGAMLLYTLTFWLLLRQSVKDNFSRKKSRSAPLQEVTTGEESGRNESVLKFVGRLVM
SCYAKYWIYVCGGMFIMVSFAGKLVGYKIIYMLLFLLCLCLYQVYYSLWRRLLKAFWWLV
VAYTMLVLITIYTFQFEDFPAYWKNFTGFTEQQLADIGLETFKLTELFTSILIPGFFLLA
CILQLHYFHRPFMRITDLDHVTPIHRKKKSHRPEVLHCADGAVFEEEELVTDLGDDESED
DEMMPSKWGLVVNRLMVLFRKFSDTLTQIQVLIWRVLELHILKMVAFFVVWVALGEPSVM
NLVLVVLWAFAMPYSRFRHMASCLSTVWVCIIIVCKMLYQLSIVDPVEYTNNCTVPLANE
TNLKDSEVLNSTLYREPVDPANWFGFRKDATVLGYSKNHLLVLMLLVFEATVNRHQAHHY
RQQQRSPPLIPAIFPQATRDTLDQGLLACIKYLLNYSFYKFGLEICFLMTVNVIGQRMNF
LVIIHSCWLVAIMVRRRRAAIAQIWPKYCLFLSIFMIYQYILCVGIPPALCIDYPWRWNT
PIIINSALIKWIYLPDFYTIPNSKNLIADFVLLMCASQQWKVFEDEKREEWMVLAGENTD
DPNPMDERPFNPAPNFINCRCYLDMAKVLVFRHMFWFVLSVVFVTGATRISVFGLGYLLA
CFFFLLFGTKLLRKPSRTRLVMWDCLIIYNVAVIISKNMLSILACVFVVEMQKSFCWVIQ
LFSLVCTVKGYYDPKSVSDKACTLPVEEAGIIWDSICFFFLLLQRRVFLSCYFLHVTADL
QASARQASRGFELFRASIVKNMRFHQEVEKKSLSQLKRSMERIRSKQEKCKEGRRKSDTK
ADPASEPQREKRSHKRGKKWQEPWLDHAKVLHSGDYYLFESDSEEEEELFSEEKKPQKQT
AFQLAYRAWVTSAKATLRERQERQKEQRRLEREERQQREQDSSPASGHEGSVEFDESISH
EEIDDNDELEGEGSGKADIVQRILDIFMLLWIVFLAMVDGLTEWLNLITKQYVDTSTVLC
NERYLLIHNVSQGPLREPMEDQLSQGSESPTMETCLGDAEGDTDHVNRTSATSGLELEEL
SERERHSGTTLCCSEPTLELLGEEPEPQHKSHYRHSRTASEMLTDRQFFVEELVQCREFY
SSQNRLLKLQFALYNLLAANSELVCYFIIVLNNMVTASVISVVLPILIFLWAMLAVPRPT
KKFWMTAIVYTEVMVVVKYLFQFGFFPWNSVYELTLNEDKPFFPPRILGLEKTDNYIRYD
LLQLLVLFFHRSLLQRYGLWDQECALEEKPSRPSEEANKKEEGEGGRRWRSIPHQLSPHP
RASLPVEGPKKKGSIMRFRKKKQLSKEALDIKAEKKAQKKKQKGKRREAASKKLIAVGEK
IKHLTITAVRNVYKPCHEFFSDILHAPYRAATDVYALMFLTDVVDFIIIVFGFWAFGKHS
AAADIASTLSEDQVPEAFLVMLLIQFSTMIIDRALYLRKTVLGKLIFQIILVFGIHLWMF
FILPAVTERMFSQNSVAQLWYFFKCIYFALSAYQIRCGYPTRILGNFLTKKFNHLNLFLF
QGFRLVPFLVELRAVMDWVWTDTTLSLSNWMCVEDIYANIFIIKCSRETEKKYPQPKGQK
KKKIVKYGMGGLIIFFLICIIWFPLLFISLVRSVVGVVNHPVDVTVTVKLGGYEPLFTMS
VQQQSIQSFTEEDYNKLTTNFYDNARAMQFITLYSYEDIVTANIEGSSGSVWRISPPSRQ
EVVKELLGSPVDMTLRLAWTFQRDLGKGGTVEHTSDKYSIDLEPGNPVRADLASLLVGNR
TDPVRVPHMFPNYIRAPNGAEAKPVDQLYKGDEEGYQDVTLSLMRDRSLNSTRGAQEWWD
ISIADCPPSTGDCGVLPMVIFNDKVSPPSLGFLAGYGIMGLYVSVVLVIGKFVRGFFSEI
SHSIMFEELPCVNRILKLCTDIFLVRETGELELEEELYSKLIFLYRSPETMIKWTRDKLS
SDNR
NT seq
7575 nt
NT seq
+upstream
nt +downstream
nt
atggaacttcaggtggtatgtggactgctctactgctttctgttgccgacgttcttgtta
gcagcctgcctgtttcgctacaatggtctgtctctggtctacctgctctacctgctgcta
ctgccatggttcctgtggcctaacaaacacacactacgaggacatactggacgcttcatc
aaggctctgttctgcaccagtcttctcttcctgctagcccatgtctccttccagatctgt
ctgtacactatccctgacctggaccatgcactgggacacaactgtagcttgtgggagacg
ctatcgaggcatgttggtgtatccaggctgcccctggatgacgtgtggagtgtggtgcat
ctgctgacccctgacctgggggtgtttgtgatctccctggttaccctggtggtgtgtaac
cggctggtcaagaagagagatgacgtcactgtcctgcccgtagcctcagactccacacag
gggacagaggatgggtcggagacaaaggagggtgaagaggaggaggaggaagaggaggga
gatgaggaaggcatgtcgtctcccagtgatcctgggatgccggtttccgcggcaactcgt
gccaagcagctggcggcccggctccgagccacagcccagaaggtcctgagggacctgggc
cggatcctggccatcaccctgctggccctggctggcatcacgttaccctcggccttctct
gcaatctacttcctgctgttcatcggcgtgtgcacatggtgggcctgccactttcccatc
agccacctaggcttcaacgtgctgtgtgtgatggtgggctttttcacggcgggccacctg
gtgtgtctctacttgtaccagtgccccattgcccagggcatcttgccccctgccagcctg
tgggccagactgtttggcctcaaggatatcgtcaaacctggcaactgctccgcctcctat
gacctcatcttcaacacggagcatgattggcctgtgtatgtcaaccccgggatcctgctt
ctcctgtacatcaccatggcaatggtcctgaagatcagcagccaccatagatcagctgac
aagggtgaggagggggcccagctggtcaaaggaacagaggctggaggaggagaggaggtg
gaactgaagccctggtccgctcagagacgacccagccaggacgacactgagcacatgctt
ctgtctattggggagtctatggagagcacaggagatggcgtcaccaatggctccagtcat
caggacttgggcccagggctcagtagcgcccctgatggacagcatggggaccaccctctg
cacctgctgggtagagtggtcatgcagcagagctacgtgtgtgctctcatcgccatgatg
gtgtggagcatcacctaccacagctggctgacgtttgtgctgctgctgtgggcgtgtctg
atctggatgatgcgtgcgaggcgccacttcgccacgctgtgctctcccttcatcctgctc
tacggcctggccctctgcttcctgcagtacgtctgggccatggagctgcagccggagctg
ccccgtaccgtgggcaccatgagcctcaggcagctgggtctggaccgagcccagtacccc
tgcctccgcctgggggccatgctgctgtacacactgacgttctggctgctcctgcgccag
tcagtgaaggacaacttcagcaggaagaagagcaggtctgcccctctacaggaggtcacc
actggagaggagagcgggcggaacgagtcggttctgaagtttgtgggcagactggtgatg
agctgctatgccaagtactggatctacgtgtgtggaggcatgttcatcatggtcagcttc
gctggcaagctggtgggctacaagatcatctacatgctgctcttcctgctttgcctctgt
ctctaccaggtgtactactctctgtggaggaggctgctcaaggccttctggtggctggta
gtggcctacaccatgctggtgctcatcaccatctataccttccagtttgaggacttccct
gcctactggaagaacttcaccggcttcactgaacagcagctggctgacatcggcctggag
acctttaagctgaccgagttgttcaccagcatcctgatcccaggcttcttcctgctggcc
tgcatcctgcagcttcactactttcacagacccttcatgaggatcacagacctggaccac
gtcacgcccatacacaggaagaagaagagccacagaccagaggtcctccactgtgctgat
ggggctgtgtttgaggaggaagaactggtgacagatctgggggatgacgaatcagaggat
gatgagatgatgcccagtaagtggggtttggtggtgaacaggctgatggttctgttcagg
aagttctctgacacactgacccagatccaagtgttaatctggagggtcctggagctgcac
atcctcaagatggtggccttttttgtggtctgggtggctctgggagagccgtctgtgatg
aacctggttctggtggtgctctgggcgtttgccatgccttactcccgcttccgccacatg
gcctcctgtctgtccaccgtctgggtctgcatcatcatcgtctgcaagatgctctaccag
ctcagcatcgtcgaccctgtcgagtacaccaacaactgcactgtgcccttggccaatgaa
accaatctgaaagattctgaggtcctgaactccactctgtacagagagcctgtagacccg
gccaactggtttggcttcaggaaggatgccaccgtactgggctatagcaagaaccacctg
ctggtgctgatgctgctggtgtttgaggccacagtgaaccgccaccaggcccaccactac
aggcagcagcagaggtcccctcccctcatcccagccatcttcccccaggccaccagagac
accctggaccagggcctgctggcctgcatcaagtacctactcaactacagcttctacaag
tttggcctggagatctgcttcctgatgacggtgaatgtgattggccaacggatgaacttc
ctagtcataatccatagctgttggctggtggccatcatggtacggcgtcgccgggcggct
atcgctcagatctggcccaaatactgcctgttcctcagcatcttcatgatctaccagtac
atactgtgtgtgggcattccccctgcactctgtatagactacccctggcgatggaacacc
cccatcataatcaactcggcgctcatcaaatggatctacctgccagacttctacaccatc
cccaactccaagaacctcattgcggactttgtcctcctgatgtgtgcctcccagcagtgg
aaggtgtttgaggatgagaagagggaggagtggatggttctggctggggagaacacagac
gaccctaaccccatggacgagcgacctttcaatcctgcccccaacttcatcaactgcagg
tgttacctggacatggccaaggtgctggtgttccgtcacatgttctggtttgtcttgtcg
gtggtgtttgtgacgggggccaccaggatcagtgtgttcggcctgggttacctgctggcc
tgcttcttcttcctgctcttcggcaccaagctgctcaggaagccctcccgcacgcgcctg
gtcatgtgggactgcctcatcatctacaacgtggccgtaatcatctccaagaacatgctg
tctatcttggcctgtgtgtttgtggtggagatgcagaaaagtttctgctgggtgatccaa
ctcttcagtctggtctgcacagtcaagggctactacgaccctaagagtgtcagtgataag
gcgtgtactctgcctgtagaggaggcagggatcatctgggacagtatctgcttcttcttc
ctcctgctgcagaggagagtgttcctcagctgctacttcctgcatgtgacagccgacctg
caggcctctgcccgccaagcctcccggggctttgagctgttcagggccagcattgtgaag
aacatgcgcttccaccaggaagtagagaagaagtccctctcgcagctcaagagatcgatg
gaacggatccgctccaaacaggagaagtgtaaagagggccgtcggaagtcagacaccaag
gcggatccggcatcagagccacagagggaaaagaggagccacaagcgtggcaagaagtgg
caagagccctggctggaccatgctaaagtgttgcattctggagattactacctgtttgag
tcggacagtgaggaggaagaagaactattttcagaagaaaaaaagcctcagaaacagact
gcctttcagctggcgtaccgggcgtgggtgaccagcgccaaggcaacgctgagagaacgc
caggagagacagaaagaacagaggaggctggaaagagaggagagacagcagagggaacag
gacagctctccagcatcaggtcatgaaggtagtgttgaatttgatgaaagtatctcacac
gaagagatagatgacaatgacgaacttgaaggagagggctcagggaaggcagacatcgtg
cagaggatcctggacatcttcatgttgctgtggatcgtgttcctggccatggtggacggc
ctaacggagtggctcaacctcatcaccaagcagtacgtggacacctccactgtgctgtgc
aacgaacgctacctcctcatacacaacgtcagccaggggcctctgagggagcctatggag
gatcagctgtcccagggcagcgagagccccactatggagacatgtctgggagacgcagag
ggagacacagaccacgtgaatagaaccagtgccaccagtgggttggagctggaggagctg
agcgagcgtgagcgtcacagcggcaccaccctgtgttgttcagagcccactctggagctg
ctgggggaggagccagaaccacagcacaaaagccactaccgccactccaggaccgccagt
gagatgctcactgacaggcagttctttgtggaggagttggtccagtgtagagagttctac
tcctctcagaaccgcctgctgaagctgcagtttgccctgtacaacctcctggctgccaac
tccgagctggtgtgctacttcatcatcgtgctcaacaacatggtgacggcctccgtcatc
tcagtggtgctgcccatcctcatcttcctctgggcaatgctggccgtgccacgccccacc
aagaagttctggatgaccgctattgtctacactgaggtcatggtggtggttaagtacctg
ttccagtttggtttcttcccgtggaacagtgtatatgagctcacactgaacgaggacaag
cctttcttccctcctcgtatcctgggcctggagaaaactgataactacatccgctatgat
ctgctgcagctgctggttctcttcttccatcgctcactgctacagcggtatggcctgtgg
gaccaggagtgtgctctggaggagaagccctctcggccatcagaggaggccaacaagaag
gaggaaggagaaggggggaggaggtggaggtccatcccacaccagcttagcccccacccc
agagccagcctgcctgtggagggacccaagaagaagggcagcatcatgcgcttccgcaag
aaaaaacaactaagcaaagaagccttagatatcaaggctgagaagaaggcgcagaagaag
aagcagaagggtaaacgtagagaggcagccagtaagaagctgatagcagtgggagagaag
atcaagcacctcaccatcaccgctgtgcgaaatgtctacaagccttgtcacgaattcttc
agcgacatcttacatgcaccgtaccgtgctgccactgatgtctacgccctcatgttcctc
actgacgtggtggatttcataatcattgtcttcggtttctgggcctttggaaaacactca
gccgcagcagacattgcttccacgctgtcagaggaccaggtgcccgaggccttcctagtg
atgctgctcatccagttcagcaccatgatcatcgaccgagccctctacctccgcaagacc
gtcctggggaagctcatcttccagatcatcctggtgttcggcatccacctctggatgttc
ttcatcctgcctgctgtcactgagaggatgttcagtcaaaactcggtggctcagctctgg
tactttttcaagtgtatctactttgccctgtcggcctatcagatccgctgtggctacccc
acccgaatcctgggcaacttcctcactaagaagttcaaccacctcaacctcttcctcttc
caggggttccgcttggtgcctttcctggtggagctccgggcagtgatggactgggtgtgg
actgacaccactctgtccctctccaactggatgtgtgtggaagacatctacgccaacatc
ttcatcatcaagtgtagccgtgagacagagaagaaataccctcagcccaaaggccagaag
aagaagaagatagtgaagtatgggatgggaggactcatcatcttcttcctcatctgcatc
atctggttcccgctgctcttcatctcattggtcagatcggttgtgggcgtggtcaatcac
cctgtggatgtcacagtgaccgtcaagctgggaggatatgagcccttgttcaccatgagt
gtccagcagcagtccattcagtccttcactgaggaggactacaacaaactcaccaccaac
ttctatgacaatgctagggctatgcagttcatcaccctctacagctatgaggacatagtg
acagctaatatcgagggtagctccgggtcagtgtggaggatcagcccacctagtcgacag
gaggtggtcaaggagctgctgggcagccctgtggacatgaccctacgcctggcctggacc
tttcagagggaccttggcaagggtggcactgtggagcacacgtctgacaagtactccatc
gatctggaaccaggcaacccagtcagagcagaccttgcttcactgctagtggggaaccgc
acagacccagtacgtgtgcctcacatgttccccaactatatccgagcaccgaacggagcc
gaggccaaaccagtcgaccagctgtataaaggtgacgaggagggctaccaggatgtaacc
ctgtctctgatgagggaccgctctctgaacagcacccgtggggcccaggagtggtgggac
atcagcatcgccgactgtcctccgtccacaggggattgcggcgtcctgcccatggtcatc
ttcaacgacaaagtcagcccccccagcttaggtttcctggcaggatatgggatcatgggt
ctgtacgtgtcggtggtgctggtgattgggaagtttgtgaggggcttcttcagtgagatc
tctcactccattatgtttgaggagctgccctgtgttaaccgtatcctcaagctgtgcaca
gacatcttcctggtcagggagaccggagagctagagctggaggaggagctctactccaaa
ctcatcttcctctaccgctcaccagagaccatgattaagtggacaagagacaagctatca
agtgacaatcgctag
DBGET
integrated database retrieval system
