Coregonus clupeaformis (lake whitefish): 121548495
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Entry
121548495 CDS
T08357
Name
(RefSeq) protein PALS1-like
KO
K06091
MAGUK p55 subfamily member 5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121548495
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121548495
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
PDZ domain-containing proteins
MAGUK family proteins
121548495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
PDZ
L27
PDZ_6
SH3_2
PDZ_2
SH3_1
SH3_9
NolB
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
121548495
NCBI-ProteinID:
XP_041715882
LinkDB
All DBs
Position
33:complement(4630955..4659255)
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AA seq
682 aa
AA seq
DB search
MITSHQNGGPGYVTEDPMGPVNGTEGPGSGAKLQQRERAVDCPPGDRVVRSVSSMVQGSR
CSAQMERMQQYQEELRRKREEDTNKGKHEIDLNASLRLKKLAQNPAKTGIDNPTFEAPEA
GKETKNGSPLPGGDTAAELEELLEALRRVQSFLVDSQSQADVALLLGLLRKEDFQSALAI
HSAVAQQMQPRGSPPLPVTAQAQGLCLEVQYILQSSQHKEGIELSNLLTSPHLQALMQAH
DRVAEQELEPEPEESVIQYMGETVKLVRLEKAGDMPLGATVRNEMDGVVVSRVVKGGAAE
RSGLLAEGDEILQINGVPVRGKNINEVHDLLTEMHGTLTFLLIPSSQNKTPPHREMVMHV
RAYFNYDPSDDPYMPCRELGLSFQKGDILHIISQDDPNWWQAYRDGDEDNQPLAGLVPGK
SFQQQREAMKKPIVDRNPDSPGKLWKKNKKQRKKTMCNPNSNADYSGDDILTYEEMALYH
QPANRKRPIALIGSPNSGQDELRRRLLSIQPDRFSGAVPHTTRSPRIHEKNGREYHFVNR
LAFETDDAAGKFIESGEYARNLYGTSSDSVQQVINSGRICLLCLHTKSLRVLRSSNLKPY
VIFIAPPSQERLRSLLAKDGKNPKPEELKELMEKAWEMEQAYGHLFDTAIVNSEPDTAFH
ELLRLIDKLDTEPQWVPSSWLC
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgatcacttctcaccagaacggaggacccggatatgtaacagaggacccaatggggcct
gttaatggcacggagggtcctgggagtggagccaagctgcagcagagagagagggcagtg
gactgcccccctggggacagggtggtgaggtctgttagcagcatggtgcagggttcccgc
tgcagcgcccagatggagaggatgcagcagtaccaggaagagctgaggaggaagagggag
gaggacaccaacaaagggaagcatgagatcgatctcaacgcctcgctcaggctcaagaag
ctggcccagaacccagccaagacgggtattgacaaccccacgttcgaagcacctgaggcg
ggcaaggagaccaagaatgggagccccctgcctggtggggacacggctgcggagctggaa
gagctgctggaggccctacggcgggtgcagagcttcctggtggacagccaatcgcaggcc
gacgtggccctgttgctgggcctgctgcgcaaggaggacttccagagcgctttggccatc
cacagtgccgtggcccagcagatgcagccgcgcggcagcccgcccttgcccgtcactgcc
caggcccagggcctctgcctggaggtgcaatacatcctccagtccagtcaacataaagag
ggtatagagctcagcaacctcctcacctctccccacctccaggctctgatgcaggcccat
gacagggtggcggagcaggagttggagccagagccagaagagagtgtgattcagtacatg
ggagagacagtcaaactggtgcggctcgagaaggccggcgacatgcctctgggagccaca
gttcgtaacgagatggacggcgtggtggtgagtcgcgtggtgaaaggaggggcagccgag
cggagcggactactggccgagggagacgagatcctgcagatcaacggcgtgcccgtccgt
gggaaaaacatcaatgaggtccatgaccttctgacagagatgcatggcactctgaccttc
cttctcatccccagctctcagaacaaaactcccccacacagagagatggtgatgcacgtg
agggcctactttaactacgacccgtccgatgacccatacatgccgtgcagggagctgggc
ctgtccttccagaagggagacatcctccacattatcagccaggacgaccccaactggtgg
caggcctacagggatggagatgaggacaaccagcccctagccgggctagtaccagggaag
agcttccagcagcagagagaagctatgaagaaacccattgtggacaggaatcctgacagc
ccagggaagctctggaagaagaacaagaagcagaggaagaagaccatgtgcaaccccaac
agcaacgctgactactccggcgatgacatcctgacctatgaggagatggcgctctaccac
cagccggccaatcgcaagcgacctatcgccctgattggttcgcccaacagcgggcaggac
gagctgcggcggaggctgctatcaatccaaccggacaggttctccggtgccgtgccacat
acaacgagaagcccacggatacatgagaagaacgggagggagtaccactttgtgaaccgg
ctggcgtttgagacggacgacgcagcagggaagttcatagagtctggggagtacgcccgg
aacctgtatggcaccagcagtgactcggttcaacaggtcatcaactcaggcaggatctgt
ctgctgtgcctgcacactaagtcactgcgggtgctgcggtcctccaacctcaagccctat
gtgatcttcatcgctcctccctctcaggaacgattgcgctccctgctggccaaggatggc
aaaaacccaaagccagaggagctgaaggagctgatggagaaggcctgggagatggagcag
gcctacggtcacctgtttgacacggccatcgttaacagcgagccagacacagccttccac
gagctgctgcggctcattgacaagctggacacagagccccagtgggtgccatcctcctgg
ttgtgctag
DBGET
integrated database retrieval system