KEGG   Coregonus clupeaformis (lake whitefish): 121548495
Entry
121548495         CDS       T08357                                 
Name
(RefSeq) protein PALS1-like
  KO
K06091  MAGUK p55 subfamily member 5
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04530  Tight junction
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    121548495
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:cclu04990]
    121548495
Domain-containing proteins not elsewhere classified [BR:cclu04990]
 PDZ domain-containing proteins
  MAGUK family proteins
   121548495
SSDB
Motif
Pfam: Guanylate_kin L27_N PDZ L27 PDZ_6 SH3_2 PDZ_2 SH3_1 SH3_9 NolB MMR_HSR1
Other DBs
NCBI-GeneID: 121548495
NCBI-ProteinID: XP_041715882
LinkDB
Position
33:complement(4630955..4659255)
AA seq 682 aa
MITSHQNGGPGYVTEDPMGPVNGTEGPGSGAKLQQRERAVDCPPGDRVVRSVSSMVQGSR
CSAQMERMQQYQEELRRKREEDTNKGKHEIDLNASLRLKKLAQNPAKTGIDNPTFEAPEA
GKETKNGSPLPGGDTAAELEELLEALRRVQSFLVDSQSQADVALLLGLLRKEDFQSALAI
HSAVAQQMQPRGSPPLPVTAQAQGLCLEVQYILQSSQHKEGIELSNLLTSPHLQALMQAH
DRVAEQELEPEPEESVIQYMGETVKLVRLEKAGDMPLGATVRNEMDGVVVSRVVKGGAAE
RSGLLAEGDEILQINGVPVRGKNINEVHDLLTEMHGTLTFLLIPSSQNKTPPHREMVMHV
RAYFNYDPSDDPYMPCRELGLSFQKGDILHIISQDDPNWWQAYRDGDEDNQPLAGLVPGK
SFQQQREAMKKPIVDRNPDSPGKLWKKNKKQRKKTMCNPNSNADYSGDDILTYEEMALYH
QPANRKRPIALIGSPNSGQDELRRRLLSIQPDRFSGAVPHTTRSPRIHEKNGREYHFVNR
LAFETDDAAGKFIESGEYARNLYGTSSDSVQQVINSGRICLLCLHTKSLRVLRSSNLKPY
VIFIAPPSQERLRSLLAKDGKNPKPEELKELMEKAWEMEQAYGHLFDTAIVNSEPDTAFH
ELLRLIDKLDTEPQWVPSSWLC
NT seq 2049 nt   +upstreamnt  +downstreamnt
atgatcacttctcaccagaacggaggacccggatatgtaacagaggacccaatggggcct
gttaatggcacggagggtcctgggagtggagccaagctgcagcagagagagagggcagtg
gactgcccccctggggacagggtggtgaggtctgttagcagcatggtgcagggttcccgc
tgcagcgcccagatggagaggatgcagcagtaccaggaagagctgaggaggaagagggag
gaggacaccaacaaagggaagcatgagatcgatctcaacgcctcgctcaggctcaagaag
ctggcccagaacccagccaagacgggtattgacaaccccacgttcgaagcacctgaggcg
ggcaaggagaccaagaatgggagccccctgcctggtggggacacggctgcggagctggaa
gagctgctggaggccctacggcgggtgcagagcttcctggtggacagccaatcgcaggcc
gacgtggccctgttgctgggcctgctgcgcaaggaggacttccagagcgctttggccatc
cacagtgccgtggcccagcagatgcagccgcgcggcagcccgcccttgcccgtcactgcc
caggcccagggcctctgcctggaggtgcaatacatcctccagtccagtcaacataaagag
ggtatagagctcagcaacctcctcacctctccccacctccaggctctgatgcaggcccat
gacagggtggcggagcaggagttggagccagagccagaagagagtgtgattcagtacatg
ggagagacagtcaaactggtgcggctcgagaaggccggcgacatgcctctgggagccaca
gttcgtaacgagatggacggcgtggtggtgagtcgcgtggtgaaaggaggggcagccgag
cggagcggactactggccgagggagacgagatcctgcagatcaacggcgtgcccgtccgt
gggaaaaacatcaatgaggtccatgaccttctgacagagatgcatggcactctgaccttc
cttctcatccccagctctcagaacaaaactcccccacacagagagatggtgatgcacgtg
agggcctactttaactacgacccgtccgatgacccatacatgccgtgcagggagctgggc
ctgtccttccagaagggagacatcctccacattatcagccaggacgaccccaactggtgg
caggcctacagggatggagatgaggacaaccagcccctagccgggctagtaccagggaag
agcttccagcagcagagagaagctatgaagaaacccattgtggacaggaatcctgacagc
ccagggaagctctggaagaagaacaagaagcagaggaagaagaccatgtgcaaccccaac
agcaacgctgactactccggcgatgacatcctgacctatgaggagatggcgctctaccac
cagccggccaatcgcaagcgacctatcgccctgattggttcgcccaacagcgggcaggac
gagctgcggcggaggctgctatcaatccaaccggacaggttctccggtgccgtgccacat
acaacgagaagcccacggatacatgagaagaacgggagggagtaccactttgtgaaccgg
ctggcgtttgagacggacgacgcagcagggaagttcatagagtctggggagtacgcccgg
aacctgtatggcaccagcagtgactcggttcaacaggtcatcaactcaggcaggatctgt
ctgctgtgcctgcacactaagtcactgcgggtgctgcggtcctccaacctcaagccctat
gtgatcttcatcgctcctccctctcaggaacgattgcgctccctgctggccaaggatggc
aaaaacccaaagccagaggagctgaaggagctgatggagaaggcctgggagatggagcag
gcctacggtcacctgtttgacacggccatcgttaacagcgagccagacacagccttccac
gagctgctgcggctcattgacaagctggacacagagccccagtgggtgccatcctcctgg
ttgtgctag

DBGET integrated database retrieval system