Coregonus clupeaformis (lake whitefish): 121548502
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Entry
121548502 CDS
T08357
Name
(RefSeq) 26S proteasome regulatory subunit 4-like
KO
K03062
26S proteasome regulatory subunit T2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
121548502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cclu03051
]
121548502
Proteasome [BR:
cclu03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
121548502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_2
AAA_22
DUF815
nSTAND3
AAA_16
AAA_5
RuvB_N
AAA_3
AAA_28
ATPase
AAA_14
AAA_25
NPHP3_N
RNA_helicase
TIP49
NACHT
AAA_33
IstB_IS21
NB-ARC
Mg_chelatase
AAA_24
AAA_7
Parvo_NS1
ABC_tran
SLFN-g3_helicase
Zeta_toxin
TsaE
Motif
Other DBs
NCBI-GeneID:
121548502
NCBI-ProteinID:
XP_041715891
LinkDB
All DBs
Position
33:4494479..4502997
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AA seq
440 aa
AA seq
DB search
MGQSQSGGHGPGGGKKDDKDKKKKYEPPIPTRVGKRKKKSKGPDAASKLPLVTPHTHCRL
KLLKQERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGNLEEIIDDNH
AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP
QETYADIGGLDSQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVA
NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG
GEREIQRTLLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT
KRRIFNIHTSRMTVADDVTLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK
KSKENVLYKKQEGTPEGLYL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaaagccagagtgggggccatggacctggtggaggcaagaaggatgacaaggac
aagaagaagaagtatgagcctcccatccccaccagagttgggaagaggaagaagaagagc
aagggaccagatgcggccagcaagctacctttagtcacccctcacacccactgccggctg
aagctgctgaagcaggagaggatcaaagactacctgctgatggaggaggagtttatcagg
aaccaggagcagatgaaaccgttggaggaaaaacaggaggaggagaggtccaaggtggat
gatctgaggggaacccccatgtctgtggggaacctggaggagatcattgatgataaccat
gccatcgtgtctacgtcagtagggtcagagcactacgtcagcatcctctccttcgtagac
aaagacctgctggagcccggctgctctgtactactcaaccacaaggtccatgctgtgatt
ggtgtcctaatggacgacactgatcccctggtcacagtgatgaaggtggagaaggcccct
caggagacctacgcggacataggaggtctggacagccagatccaggaaatcaaggagtca
gtggagctgcccctcacccaccctgagtactatgaggagatgggcattaagcctcctaaa
ggagtcatcctctacggagcacctggcactggtaagaccctgctggccaaggcggtggcc
aaccagacgtcagctacgtttctgcgtgtggtgggctctgagctgatccagaagtacctt
ggggacgggcccaagctggtccgagagttgttcagggtggccgaggaacacgcaccctcc
atcgtcttcatcgatgagatagacgccatcggcactaaaagatatgactctaactctgga
ggagaaagggagatccagaggactttgctggagcttctcaaccagctggatggttttgat
tccagaggagacgtgaaggtgatcatggccaccaacaggatagagactctggaccctgcc
ctcatcaggcctgggcgtattgacaggaagatagagttccctctgcctgatgagaagacc
aagaggaggatcttcaacatccacaccagcaggatgaccgtagcagacgacgtcaccctg
gacgacctgatcttggctaaagatgacctatcaggagctgacatcaaggccatctgtact
gaggctggcctcatggcccttagagagcgcaggatgaaggtcaccaacgaggacttcaag
aagtccaaggagaatgtgctgtacaagaagcaggagggcacgccggagggcctgtacctc
taa
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