Coregonus clupeaformis (lake whitefish): 121548505
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Entry
121548505 CDS
T08357
Name
(RefSeq) neurexin-3b-like
KO
K07377
neurexin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121548505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121548505
Membrane trafficking [BR:
cclu04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
121548505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
121548505
NCBI-ProteinID:
XP_045066077
LinkDB
All DBs
Position
33:13855808..14374680
Genome browser
AA seq
1713 aa
AA seq
DB search
MNPFSLPQCVLLLLSTLLGLCQGLEFRGSEDQWARYLRWDASTRSDLTFQFKTDASDALI
LYFDDGGYCDFLLLTVTEGKLQLRFSIDCAETTVTSDKSVNDSCWHFAMVSRHNLRTVLA
LDGQTKAEEVRPQRQFMKIVSDLFLGGIPGDIRTSAITLPTVRELPPFKGVITDLNYGNK
VPTLINSQKVRLEMMGLCTENPCENGGHCSMADGEPYCECSKTGYTGRTCSQAVQRKPGF
SHLKAPESGRSKAREENVATFRGSEYFCYDLSQNPIQSSSDEITLSFKTWQRNGLLLHTG
KSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNGWHDIKVTRNLRQVTISVDG
ILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNNDIRLELS
RLARIIDPKMKLQGDVVFKCENVPTLDPINFESPDSYLSLPKWNTKRVGSISFDFRTSEP
NGLILFTHGKAQDRWDAAGKKNNKVDFFAVELLDAGLYLLLDMGSGTIKVKATQSKVNDG
AWHHVDIQRDGRSGIISVDSRRTPFTASGENEILDLEGDLYLGGLPDNRVGLVLPTELWT
AMLNYGYVGCIRDLFIDGRSKNIRAISESQNTTGIRPTCSKMTGKQCDSKPCKNNGVCKE
GWNRFICDCTGTGFWANTCEREASILSYDGSMYMKVVMPAVMHTEAEDVSLRFMSQRAFG
LLMAATSRDSADTLRLELDSGRVKLTVNLDCVRINCNTSKGPETRYAGQKLNDNDWHSVR
VVRRGKNFKLTVDEDVAEGQMAGDHTRLEFHNIETGILTEKRFISSSPSSFIGHLQGLKF
NGMFYIDMCKNGDIDFCELNARFGMRSIIADPVTFKSKGSYLGLATLQAYTSMHLFFQFK
TTSPDGFILFNSGDGNDFIAVELVKGFVHYVFDLGNGPSLLKGNSESALNDNQWHNVVIT
RDATNTHTLKVDAKSVTQNVNGAKNLDLKGDLFVAGLGPNMYQNLPKLVVSREGFQGCLA
SIDLNGRLPDLINDALFRSGQIERGCEGPSTTCQEDSCANMGVCIQQWENFTCDCTMTSY
TGTQCNDPGTTYIFGKGGGLITYTWPNNERPSTRTDRLAVGFSTTIKDGILVRIDSAPRL
GDYIMLHITEGKVGVTFNIGTVDISVKELTTAINDGKYHLVRFTRNGGNATLQVDNWPIN
EHFPTGPSDVERYQMGNKKIPFNYKRPVEDWLQEKGRQLTIFNTQAAISIGGNDRKRPYQ
GQLSGLYYNGLKVLNMAAEGHANIKVNGSVRLVGDMPTSRGAARTTTSVPPEMSTTFIET
TTTLSTTTTRKQRSPPTIQTTDDIVSSAECSSDDEDLEECDSGHAGGELVIPVLVEDPID
IPPVSTRSTFIPLPPTLRPVLTIIETTKESLPMATEVGVPCLSDRGSDDCDDGLDGDGGD
YDGMVISGFGSGEAFDSSLPPTDDEDFYTTFSLVTDKILTTSAYEGGYNALAPKWEAKDL
RPSKASEAGRTTPTPPLPDLRGTVAEASLPSDSTPAKLPAGKMDNREVIKALQPDIVLLP
LPTASFDLDGTKPRGPLITSPMLRTVPAALPTAPVVRRVPPGPSEVIRESSSTTGMVVGI
VSAAALCILILLYAMYKYRNRDEGSYQVDETRNYISNSAQTNGTVVKDKAPTGAVAPRDP
AARDRKTRTKNTMYRNKSTIPNTKKLTVWRKYE
NT seq
5142 nt
NT seq
+upstream
nt +downstream
nt
atgaatccctttagtctccctcagtgtgttcttctgctgctcagtacactgctgggtctg
tgtcagggcctggagttcaggggttctgaggaccagtgggcacggtacctccgctgggac
gccagcaccagaagtgacctcaccttccagttcaaaacagacgcgtctgacgccctgatc
ctctacttcgacgacggcggctactgtgacttcctgcttctcaccgtaacggaagggaag
ctccagctccgcttcagcatcgattgcgccgagaccacggtcacctccgacaaatcggtc
aacgacagctgctggcacttcgcgatggtcagccgacacaacctcagaacggtcttggcc
ctggacgggcagaccaaggcggaggaggttcgaccacagcggcagttcatgaagatagtc
agcgacctgttcctcgggggcatacccggagacatcaggacctcggccatcaccctgccg
acggttagagagctgcctccgttcaaaggagttatcacagatctgaattacgggaacaag
gttcccacgctgatcaacagtcagaaggtacgtctggagatgatgggtctctgtacagag
aacccgtgtgagaacggaggccactgctccatggctgatggagaaccctactgcgaatgc
tccaaaacgggatatacaggaaggacctgcagtcaagccgttcagaggaaaccaggcttt
tcacatctgaaggcacctgagtcaggtagaagcaaagcgagagaagagaacgtggcgacg
ttccgtggttccgagtacttctgctacgacctgtcccagaaccccatccagtcctccagt
gatgagatcacgctctccttcaagacgtggcagaggaacggcctcttactccacacaggg
aagtctgctgactacgtcaacctggccctaaaggacggggcggtgagcctggtcatcaac
ctgggctccggggccttcgaggccattgtggagcccgtcaacgggaagttcaacgataat
ggctggcacgacatcaaggtcacacgcaacctcagacaggtgaccatctctgtggatggg
atcctcaccacgacaggctatacccaggaagactacaccatgctggggtctgacgacttc
ttctacgtgggtgggagtcctagtacggctgacctacctggttctcctgtcagcaacaac
ttcatgggctgcctgaaagaggtggtctataagaataatgacatccgtctggagctctcc
cgtctggcccgcatcatagaccccaagatgaagctccaaggtgacgtggtgtttaagtgt
gaaaacgtacccaccctggaccctattaactttgagagccctgattcctacctcagcctg
cccaagtggaataccaagagggttggctccatctccttcgatttcaggacctctgaaccc
aacggactcatcctcttcacccatggcaaggcccaggaccgttgggacgcggcagggaag
aagaacaacaaggttgacttcttcgctgtggagctgctagatgcagggctgtacctgctg
ctggacatgggctcaggaaccatcaaggtcaaagccacacagagcaaggtcaatgacgga
gcctggcaccacgtggatatacagagggacgggcgatcaggcatcatctcagtagacagt
cggaggacccccttcacggccagcggagagaatgagatcttagacctggagggagacctc
tacctgggtggtctccctgacaaccgggtaggcctggtgttacctaccgaactgtggaca
gccatgttgaactacggctacgtgggctgcatcagggaccttttcatcgatggacgctcc
aaaaacataagggccatctccgagtctcagaacaccacaggcatcaggcccacctgtagt
aaaatgacagggaaacagtgtgatagtaaaccctgtaagaacaacggagtctgtaaggaa
gggtggaaccgctttatatgtgactgcaccgggactggcttctgggccaacacgtgtgag
agagaggcgtctatcctgagctatgatggcagtatgtacatgaaggtggtgatgcccgcc
gtgatgcacacagaggcagaggatgtctccctacgcttcatgtcccagcgtgcttttggg
ctcctcatggccgctacctcccgggactccgccgacacgctccgtctggagctcgacagc
ggccgtgtcaaactcacggtcaacctagactgtgtcaggataaactgtaacaccagcaag
ggaccagagactcggtatgcgggccaaaagctaaatgataatgactggcactctgtcaga
gtggtccgacgcggtaagaacttcaaactgacagtcgatgaagacgtagctgaaggccag
atggcaggcgaccacacccgtctagagttccataatatagagacaggcattctgacagag
aagcgtttcatctcgtcctccccctcctctttcattggacacctgcagggcctgaagttc
aatggcatgttctacattgacatgtgtaagaatggagacatcgacttctgtgagctcaat
gcccgctttggcatgcgctccatcatcgctgacccagtgaccttcaagtccaagggcagc
tacctggggctggccaccctgcaggcctacacctccatgcacctgttcttccagttcaag
accacatcgcctgacggattcatactgttcaacagtggagacgggaacgacttcattgct
gtggagctggtcaaagggtttgtccactatgtgtttgacctggggaacgggcccagtctg
ctgaaggggaacagtgagagtgccctgaatgacaaccagtggcacaacgtagtcatcact
agggacgccaccaacacacacaccctcaaggtggatgccaagtctgtcacacagaacgtc
aacggagccaagaacctcgacctcaaaggtgatctgtttgtggcaggactggggcccaac
atgtatcagaaccttcctaagcttgttgtctctagggaaggtttccagggctgtctggcg
tctatagatctcaacggccgtctgcctgacctcatcaacgatgccctgttccgctccgga
cagatcgaacgcggctgtgaaggacccagcaccacctgtcaggaagactcctgtgccaac
atgggcgtgtgtattcaacagtgggagaacttcacctgcgactgcaccatgacctcttac
acagggacacagtgcaacgaccctggtaccacgtatatcttcggtaaaggcgggggtctg
atcacatacacatggcctaacaatgagaggcccagcacgcgtaccgaccgtctggctgtg
ggcttcagcaccaccatcaaggacggcatcctggtccgcatcgacagcgctccacgacta
ggggactacatcatgttacacatcacggaaggcaaggtgggcgtgacgttcaacattggc
acggtggacatcagtgtgaaggagttaaccactgcgatcaatgacggcaaataccacctg
gtgcgattcacaaggaatgggggaaacgccaccctgcaggtggacaactggccaatcaac
gaacacttccccacaggaccaagcgacgttgagcgctatcaaatgggtaataagaaaatc
ccattcaattataagaggccggtagaagattggctgcaggagaaaggccggcagctcacc
atcttcaacacccaggctgccatctctataggcggtaatgaccgtaaacgcccctaccag
ggccagctgtccggcctctactacaacggactaaaggtcctcaacatggccgccgaaggc
cacgccaacatcaaggtgaacgggagcgtccgattggtgggtgacatgcccaccagtagg
ggcgctgcccgcaccaccacctctgtgccacctgagatgtccaccaccttcatagagacc
actacgactctgtctacgaccacgacgaggaaacagcgctccccacccactattcagacg
acagatgacattgtatcatcggcggagtgttccagcgatgacgaggatctggaggagtgt
gattccggacacgcaggaggggagttagtcatccccgtacttgtagaggatcccatagac
atccctcctgtttccacccgttccaccttcatccccctccccccaaccctccgccccgtc
ctcaccattatcgagaccacaaaagagtccctgcccatggccactgaggtgggggtacct
tgcttgtcggaccgaggcagcgatgattgtgatgatggtcttgatggtgatggtggtgat
tatgatggcatggtgatttcggggtttggctctggcgaagctttcgactctagcctgccc
cctactgacgatgaagatttttacaccaccttctccctggtaacagataagatcttgacc
acgtcggcctatgaaggtggctacaacgctctcgcgcccaagtgggaggccaaggacttg
aggcctagtaaagcctcagaggcgggtaggactacacccaccccgcctctacccgacctc
aggggcactgtagcggaggcgtccctcccatcagacagcacgccagccaaactgcccgcc
gggaaaatggacaaccgcgaagtgatcaaagccctgcagccggacatagtcctgctgcct
ctgcccactgcgtccttcgacctggatggcaccaagcctcgtgggcccctcatcacctca
cccatgctgcgtacggtgcccgccgcgttacccaccgcacccgtcgtgaggcgtgtgccc
ccggggccctctgaggtgatacgagaatccagcagcacaacgggcatggtggtggggatc
gtctcggccgcggcactctgcatcctcatcctcctctatgccatgtacaagtacaggaac
agggacgaaggttcctaccaggtagacgagacacggaattacatcagcaactcggcgcag
accaacggcaccgtggtgaaagacaaagcgcccaccggggcagtggcgccaagggatcca
gcggcaagagaccgaaagacaaggacaaagaatactatgtatagaaataaatcaaccatt
cctaacacaaaaaaattaactgtttggagaaaatatgaatga
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integrated database retrieval system