KEGG   Coregonus clupeaformis (lake whitefish): 121548506
Entry
121548506         CDS       T08357                                 
Name
(RefSeq) SNW domain-containing protein 1
  KO
K06063  SNW domain-containing protein 1
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03040  Spliceosome
cclu04330  Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121548506
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    121548506
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cclu03041]
    121548506
Spliceosome [BR:cclu03041]
 Complex B
  Other components
   Prp19-related factors
    121548506
 Complex C
    121548506
SSDB
Motif
Pfam: SKIP_SNW
Other DBs
NCBI-GeneID: 121548506
NCBI-ProteinID: XP_041715896
LinkDB
Position
33:complement(13554888..13566934)
AA seq 558 aa
MNIVASTTCDVSLCDQRKKLNMSLTSFLPAPTQLSQDQLESEERARAQRSHSTALVSSRR
EPPPYGYRKSWVPRSLEDFGDGGAFPEIHVAQFPLEMGRKKKTSNALAVQVDAEGKIKYD
AIARQGQGKDKVIFSKYTDLLPKEVLNDDAPELQKPDEEAVKELTEKTRDALMKQVSQKI
AAAMPVRAADKQAPAQYIRYTPSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIP
RGPPSPPAPVMHSPSRKMTVKEQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVH
INENFAKLAEALYIADRKAREAVEMRAQVEKKMAQKEKEKKEEKLRELAQMARDRRAGIK
GHGGDKAGEDGEARERDEIRHDRRKERQHDRNISRAAPDKRSKLQRDQDRDISELIALGQ
PNPRASSEAQYDQRLFNQSKGMDSGFAGGEDEMYNVYDQPFRRGADMAQNIYRPTKSSDK
DMYGDDLDTLMQTNKFVPDREFSGTDHGPRRDGPVQFEEDPFGLDKFLEEAKQHGGSKRP
STSRGSKDYDHDKKRRKE
NT seq 1677 nt   +upstreamnt  +downstreamnt
atgaacatagtggcgtccactacgtgtgacgttagtctgtgcgatcaacggaagaaatta
aacatgtcgcttacgagctttctaccggcgccgacccagctgtcccaggaccagctggag
tcagaggagagagcccgggcacagaggtcccactccaccgccctggtctcctcccgcaga
gaaccccctccctacggctacaggaagagctgggtgccccgctctctggaggactttggt
gatggcggtgccttcccagagatccacgttgcccagttccctctggagatgggtaggaag
aaaaagacgtccaacgcactggccgttcaggtggacgctgagggcaagatcaaatacgac
gccatcgccagacagggacagggcaaggacaaggtgatcttcagtaagtacacagacctg
cttcctaaggaagtgctgaacgatgatgctcctgagctgcagaagcctgacgaggaggct
gtcaaagagctgacagagaagacccgtgatgctctgatgaagcaggtctctcagaagatc
gctgcagccatgcctgtgagggcagcagacaagcaggcccctgcacagtacatcaggtac
actccttcccagcagggtgtggccttcaactccggggccaagcagagggtcatccgtatg
gtggagatgcagaaggatcccatggagcccccacgcttcaagatcaacaagaagattcct
cgtggacctccctcccctcctgcaccagtcatgcactcccccagcagaaagatgactgtc
aaggagcaacaggagtggaagattcctccctgtatttcaaactggaagaacgcaaagggt
tacaccatcccactggacaagcgtctggctgcagatgggagaggactgcagaccgttcac
atcaacgagaactttgccaaactggccgaggcgctctacatcgctgacagaaaggccaga
gaggctgtggagatgagagcccaggtggagaagaagatggcccagaaagagaaggagaag
aaggaggagaagctcagagagctggctcagatggcccgggaccgcagggcagggatcaaa
ggtcacggaggggacaaagctggagaggacggtgaggccagagagcgtgacgagatccgt
catgaccggaggaaagagagacagcacgacaggaacatctccagagccgcccccgataag
cggtcgaagctgcagagagaccaggacagagatatcagtgagctcatcgctctgggccag
cccaaccctagggcctccagcgaggctcagtacgaccagagactgttcaaccagagcaag
ggtatggacagcggttttgcaggcggggaggatgagatgtacaatgtgtacgaccagccg
ttcaggagaggcgccgacatggctcagaacatctaccggcccaccaagagctctgacaag
gacatgtatggcgacgacctggacacactcatgcagaccaacaagtttgttccggaccgt
gagttctctggtacggaccacggtcctcgtcgtgacggccccgtccagtttgaggaggat
ccgttcggtctggacaagttcttggaggaggctaagcagcacggcggctccaagagaccc
tccaccagtagaggctccaaggactacgaccacgacaagaaacgcaggaaggagtga

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