Coregonus clupeaformis (lake whitefish): 121548506
Help
Entry
121548506 CDS
T08357
Name
(RefSeq) SNW domain-containing protein 1
KO
K06063
SNW domain-containing protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03040
Spliceosome
cclu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121548506
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121548506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121548506
Spliceosome [BR:
cclu03041
]
Complex B
Other components
Prp19-related factors
121548506
Complex C
121548506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
121548506
NCBI-ProteinID:
XP_041715896
LinkDB
All DBs
Position
33:complement(13554888..13566934)
Genome browser
AA seq
558 aa
AA seq
DB search
MNIVASTTCDVSLCDQRKKLNMSLTSFLPAPTQLSQDQLESEERARAQRSHSTALVSSRR
EPPPYGYRKSWVPRSLEDFGDGGAFPEIHVAQFPLEMGRKKKTSNALAVQVDAEGKIKYD
AIARQGQGKDKVIFSKYTDLLPKEVLNDDAPELQKPDEEAVKELTEKTRDALMKQVSQKI
AAAMPVRAADKQAPAQYIRYTPSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIP
RGPPSPPAPVMHSPSRKMTVKEQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVH
INENFAKLAEALYIADRKAREAVEMRAQVEKKMAQKEKEKKEEKLRELAQMARDRRAGIK
GHGGDKAGEDGEARERDEIRHDRRKERQHDRNISRAAPDKRSKLQRDQDRDISELIALGQ
PNPRASSEAQYDQRLFNQSKGMDSGFAGGEDEMYNVYDQPFRRGADMAQNIYRPTKSSDK
DMYGDDLDTLMQTNKFVPDREFSGTDHGPRRDGPVQFEEDPFGLDKFLEEAKQHGGSKRP
STSRGSKDYDHDKKRRKE
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgaacatagtggcgtccactacgtgtgacgttagtctgtgcgatcaacggaagaaatta
aacatgtcgcttacgagctttctaccggcgccgacccagctgtcccaggaccagctggag
tcagaggagagagcccgggcacagaggtcccactccaccgccctggtctcctcccgcaga
gaaccccctccctacggctacaggaagagctgggtgccccgctctctggaggactttggt
gatggcggtgccttcccagagatccacgttgcccagttccctctggagatgggtaggaag
aaaaagacgtccaacgcactggccgttcaggtggacgctgagggcaagatcaaatacgac
gccatcgccagacagggacagggcaaggacaaggtgatcttcagtaagtacacagacctg
cttcctaaggaagtgctgaacgatgatgctcctgagctgcagaagcctgacgaggaggct
gtcaaagagctgacagagaagacccgtgatgctctgatgaagcaggtctctcagaagatc
gctgcagccatgcctgtgagggcagcagacaagcaggcccctgcacagtacatcaggtac
actccttcccagcagggtgtggccttcaactccggggccaagcagagggtcatccgtatg
gtggagatgcagaaggatcccatggagcccccacgcttcaagatcaacaagaagattcct
cgtggacctccctcccctcctgcaccagtcatgcactcccccagcagaaagatgactgtc
aaggagcaacaggagtggaagattcctccctgtatttcaaactggaagaacgcaaagggt
tacaccatcccactggacaagcgtctggctgcagatgggagaggactgcagaccgttcac
atcaacgagaactttgccaaactggccgaggcgctctacatcgctgacagaaaggccaga
gaggctgtggagatgagagcccaggtggagaagaagatggcccagaaagagaaggagaag
aaggaggagaagctcagagagctggctcagatggcccgggaccgcagggcagggatcaaa
ggtcacggaggggacaaagctggagaggacggtgaggccagagagcgtgacgagatccgt
catgaccggaggaaagagagacagcacgacaggaacatctccagagccgcccccgataag
cggtcgaagctgcagagagaccaggacagagatatcagtgagctcatcgctctgggccag
cccaaccctagggcctccagcgaggctcagtacgaccagagactgttcaaccagagcaag
ggtatggacagcggttttgcaggcggggaggatgagatgtacaatgtgtacgaccagccg
ttcaggagaggcgccgacatggctcagaacatctaccggcccaccaagagctctgacaag
gacatgtatggcgacgacctggacacactcatgcagaccaacaagtttgttccggaccgt
gagttctctggtacggaccacggtcctcgtcgtgacggccccgtccagtttgaggaggat
ccgttcggtctggacaagttcttggaggaggctaagcagcacggcggctccaagagaccc
tccaccagtagaggctccaaggactacgaccacgacaagaaacgcaggaaggagtga
DBGET
integrated database retrieval system