Coregonus clupeaformis (lake whitefish): 121548533
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Entry
121548533 CDS
T08357
Name
(RefSeq) serine/arginine-rich splicing factor 5 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03040
Spliceosome
cclu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121548533
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121548533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121548533
Spliceosome [BR:
cclu03041
]
Common components
Common spliceosomal components
SR proteins
121548533
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
PRP38_assoc
SET_assoc
Motif
Other DBs
NCBI-GeneID:
121548533
NCBI-ProteinID:
XP_041715934
LinkDB
All DBs
Position
33:complement(3094752..3101486)
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AA seq
326 aa
AA seq
DB search
MSGCRIFVGRLNPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGK
ELCNERVTIEHARVRLRGGRGRGGDRGGGGGRFPDRYGRGSQDSRRTNQPSGQPADRNPP
PMRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNALE
KLSGKEINGRKIKLIEAAKKRGSRSRSRSESSSRSRSRSRNRSPSRSRTPRRSRSHSPKS
RSPKRDYNRSHSRSHSGSPAPRGGAGGGAAPASPPPRAKETSSSSKRPSKPSKSASPHSP
PPAQRAPSRSRSRSRGSRSPSTDSRH
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagtggctgccgcatatttgtcggccggttgaacccgtccgccagagagaaggacgtg
gagaggtttttcaaaggatacggccgcatccgagacatcgacctgaagaggggctttggt
tttgttgagtttgatgatcctagggatgctgaggatgcagtttatgaactggatggcaag
gagctctgcaatgagagggtgaccattgagcacgcccgtgtgcgcctgcgtggtggccgg
ggacgtggtggcgacagaggaggtggtggaggccgcttcccagatcgctacggccgtggc
tcccaggatagtcggaggaccaaccaacccagtggacaaccggcagataggaaccccccg
ccgatgcgtacggagaaccgtctcatcgtggagaacctgtcatctcgcgtcagctggcag
gacctgaaggatttcatgagacaggctggggaagtcacgttcgccgacgcccaccgcccc
aagctcaacgaaggggtggttgagttcgcctcttacagcgatctgaaaaacgcccttgag
aagctgtctggcaaggagatcaatggaaggaagatcaagctgattgaggcagcaaagaag
aggggttccaggagtcgttcccgctccgagagctcttctcgttcccgctcccgttctcgt
aaccgttccccgtcccgctccaggaccccccgtcgttccaggtcccactcccccaaatcc
cgctcccccaagagggactacaaccgctctcattctcgttcccacagtggttccccagcc
ccccgtggaggcgcaggtggtggcgctgcccccgcctccccaccccctagggccaaagag
acctcctcttcctctaaacggccatccaagcccagcaagtctgcctctccccactcccct
ccccctgcacagcgtgcaccttccaggtctcgttccaggtctcgcggctctcgctctccg
tccacagacagccgccactga
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