Coregonus clupeaformis (lake whitefish): 121548546
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Entry
121548546 CDS
T08357
Name
(RefSeq) exostosin-like 3
KO
K02370
alpha-1,4-N-acetylglucosaminyltransferase EXTL3 [EC:
2.4.1.223
2.4.1.224
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
cclu01100
Metabolic pathways
Module
cclu_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
121548546
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
121548546
Enzymes [BR:
cclu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.223 glucuronosyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
121548546
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
121548546
Glycosyltransferases [BR:
cclu01003
]
Glycan extension
O-Glycan
121548546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
ADIP
MscS_porin
TPR_MLP1_2
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
121548546
NCBI-ProteinID:
XP_041715946
LinkDB
All DBs
Position
33:5526869..5537807
Genome browser
AA seq
917 aa
AA seq
DB search
MMQRNGGGVGAGGQPWVLRRVRLTWLSFMLFFILVFFPLIAHYYLTTIDEAGGPDKRIFG
PRPGGELCEAKHVQDLCRIRESVSEELLQLEAKRQELNGEIVRLNLRIEACKRSIDSAKQ
DLLQLKNVISQTEHSYKELMAQNQPKLSLPVRLLPDKDDPGLPPPKSAHVCRLRSCFDYA
RCPLTSGFPVYVYDTASYPWGESLDPLVRQAFATSVKSSIYVTDNPRIACLYVVLVGELQ
ESPSSPLPAPSALEKQLKALPYWRSDGHNHLLVHLSRKSMTQNFLYNVSTGRAAVAQSTF
LEQQYREGFDLVVSPLVHALSEPNFLEVPPQVPVKRKYLFTFQGERVESLRSSLQKEPPQ
SFEEEMEGDPPADYDDRIIGTLKAVQDSNLDQVLVEFTCKSPRPSLPTEWAMCGEREERL
EVLKASTFALVISPGDGQLMASAGNGMRLFEALEVGAIPVVLGDHARLPYHQLIQWSEAA
IMVPKPRITELHFLLRSLSDNDLLAMRRQGRFLWETYFSTSENVLGTILASVRTRIQVPP
TPIREEPAQEIPHKVGKMAGTDANLADNGDLDLGPVETEPPYASPRFLRNFTYTASDTYQ
TWNRAPGPFHLFPHTPLDPVLPSEAKFLGSGTGFRPISGGTGGSGKEFQAALGGNVPREQ
FTVVMLTYEREEVLMNSLERLNGLPYLNKVVVVWNSPKPPSDDLLWPDIGLPIVVVRTEK
NSLNNRFLPWDVVETEAILSIDDDAHLRHDEIMFGFRVWREARDRIVGFPGRFHAWDVNH
QSWLYNSNYSCELSMVLTGAAFFHKYYAYLYSYVMPQAIRDMVDEYINCEDIAMNFLVSH
ITRKPPIKVTSRWTFRCPGCPQALSHDDSHFHERHKCINFFVKVYGYMPLLYTQFRVDSV
LFKTRLPHDKTKCFKFI
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagcgtaacggtggtggggtgggggctggtggccagccgtgggtgctgcggcgc
gtacgcctcacctggctcagcttcatgctcttcttcatcctggtcttcttcccgctcatc
gcccactactacctcaccaccatcgacgaggcgggcggacccgacaagcgcatcttcggg
ccgcggcccggcggtgagctgtgcgaagccaagcacgtgcaagacctgtgccgcatccgc
gagtcggtcagcgaggagctgctacagctggaggccaagcggcaggagctgaacggggag
atcgtccggctcaacctgcgcatcgaggcgtgcaagcggagcatcgacagcgccaagcag
gacctgctgcagttgaagaacgtcatcagccagacggagcactcatacaaggagctgatg
gcccagaaccagcccaagctctcgcttcccgtgaggttattacccgacaaggacgacccg
gggctacccccacccaagtctgcccacgtctgccgcctgcgctcctgcttcgactacgcc
cgctgcccgttgacctcgggcttccccgtgtacgtctatgacacggcctcatacccctgg
ggtgagtccctggacccgctggtcaggcaggccttcgccacctcagtgaagagcagcatc
tacgtgacggataaccccaggatcgcctgtctgtatgtggtgctggtgggggagctgcag
gagtctccctcctcccccctcccggccccctcagcgctggagaagcagctgaaggctctg
ccctactggaggtctgacggacacaaccacctcctggtccacctttccaggaagtccatg
acgcagaacttcctgtacaatgtgagcacgggccgggcggcggtggcccagtccaccttt
cttgagcagcagtaccgcgagggcttcgacctggtggtgtccccgctggtacacgccctc
tctgagcccaatttcctagaggtgccaccccaggtgcctgtcaagaggaagtatctgttc
accttccagggcgagagggtggagtctctgaggagcagcctgcagaaggagccaccccag
tcctttgaggaggagatggagggagacccgccagccgactacgatgatcgcatcatcggc
acgcttaaggcagtgcaggacagcaacctggaccaggtgctggtggagttcacctgtaag
agcccgcggcccagcctgcccacagagtgggccatgtgtggggagagggaggagcggctg
gaggtcctcaaggcctccacctttgccctggtcatctctcccggggacggtcagctaatg
gcgtcagcgggcaacggcatgaggctgtttgaggccctggaggtgggggccatccctgtg
gtactgggggaccacgccaggctgccctaccatcagctgatccaatggagcgaggcggcc
attatggtgcctaagccccgtatcaccgagctgcacttcctgctacgcagcctatcagac
aatgacctgctggccatgcggcggcagggccgcttcctgtgggaaacctacttctctacc
tcagagaacgtcctgggaactatcctggctagcgtccggacccgcatccaggtacccccc
acgcccatccgcgaggagcccgcccaggagatcccccacaaggtgggcaagatggcgggc
acggacgccaacctggccgacaacggcgacctggacctgggtccagtggagacggagcca
ccctacgcctcgccacgcttccttcgcaacttcacctacacagcgtccgacacctaccag
acctggaaccgagccccggggcctttccaccttttccctcacacgccgctggaccccgtg
ctgccctctgaggccaagttcctgggctcgggtacgggcttccgccccatcagcggtggc
acggggggctcggggaaggagtttcaagcagcgctgggagggaacgtgccccgggagcag
ttcaccgtggtcatgctgacctacgagagggaggaggtgctgatgaactccctggagagg
ctcaacgggctgccctacctcaacaaggtggtggtggtgtggaactcccccaagcctcct
tcagacgacctgctgtggccagacatcggcctgcccatcgtggtggtgcgcacggagaag
aacagcctcaacaaccggttcctgccctgggatgtcgtggagacggaggccatcttgtcc
atcgacgatgacgcccacctccgccacgacgagatcatgtttgggttcagagtatggagg
gaggccagggaccgcattgtgggcttccctgggaggttccatgcctgggacgtcaaccac
cagtcgtggctctataactcgaactactcctgtgaactgtcgatggtactgacgggcgcc
gccttctttcacaagtactatgcgtacctgtactcgtacgtgatgccccaggccatccgc
gacatggtggatgagtacatcaactgtgaggacatcgccatgaacttcctggtgtcgcac
atcacgcgcaagccccctatcaaggtgacgtctcgttggaccttccgctgccccggctgc
ccgcaggccctgtcgcacgacgactcgcacttccacgagcgccacaagtgcatcaacttc
tttgtcaaggtgtacggctacatgcccttactctacacgcagttccgcgtggactctgtg
ctcttcaagacgcgcctaccccatgacaagactaagtgcttcaagttcatctag
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