Coregonus clupeaformis (lake whitefish): 121548589
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Entry
121548589 CDS
T08357
Name
(RefSeq) serine/threonine-protein phosphatase PP1-beta catalytic subunit-like isoform X1
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03015
mRNA surveillance pathway
cclu04114
Oocyte meiosis
cclu04218
Cellular senescence
cclu04261
Adrenergic signaling in cardiomyocytes
cclu04270
Vascular smooth muscle contraction
cclu04510
Focal adhesion
cclu04810
Regulation of actin cytoskeleton
cclu04910
Insulin signaling pathway
cclu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121548589
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
121548589
04218 Cellular senescence
121548589
09144 Cellular community - eukaryotes
04510 Focal adhesion
121548589
09142 Cell motility
04810 Regulation of actin cytoskeleton
121548589
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
121548589
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
121548589
04270 Vascular smooth muscle contraction
121548589
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121548589
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121548589
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cclu03021
]
121548589
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121548589
03041 Spliceosome [BR:
cclu03041
]
121548589
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
121548589
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
121548589
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
121548589
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
121548589
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121548589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
121548589
NCBI-ProteinID:
XP_041716003
LinkDB
All DBs
Position
33:8552812..8571746
Genome browser
AA seq
327 aa
AA seq
DB search
MAESELNVDSIISRLLEVRGCRPGKIVQMTEAEVRGLCIKSREIFLSQPILLELEAPLKI
CGDIHGQYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLL
RGNHECASINRIYGFYDECKRRFNIKLWKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQ
SMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDL
DLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDESLMCSFQILKPSEK
KAKYQYGGVNTGRPVTPPRTAQAPKKR
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaagcgagctcaacgttgacagcatcatctcccgattgcttgaagtgcgagga
tgccgtccagggaagatagtccagatgacggaggcggaggtgcgggggttgtgcatcaag
tcccgggagatcttcctcagccagcccatcctactggagctggaggctccgctcaaaata
tgtggggatatccatggccagtacacagacctgctgcggctctttgagtacgggggcttc
ccgccggaggctaactacctgttcctaggggactacgtggaccgaggcaagcagtccttg
gaaaccatctgcctactgctggcctacaagatcaaataccctgagaacttcttcctgctc
agaggaaaccacgaatgtgcctccatcaaccgcatctacggtttctatgacgagtgcaaa
cgcagattcaacataaagctgtggaagaccttcacagattgcttcaactgtctgcccatt
gccgctataatcgatgagaagatcttctgctgccatggaggtctctctcctgatctgcag
tccatggagcaaatccgacgcatcatgaggcccactgatgtccctgacacaggcctgctt
tgtgacctgctgtggtcagatccagacaaagacgtgcagggctggggggaaaacgaccgg
ggcgtctccttcaccttcggggccgacgtggtcagcaagttcctcaaccgccatgacctg
gacctcatctgcagagcccaccaggttgttgaggatggctacgagttctttgccaaacgg
cagctggtgacgctgttctcggctcccaactactgcggggagtttgacaacgctgggggc
atgatgagcgtggacgagtccctcatgtgttcctttcagattttgaagccgtcagagaaa
aaagctaagtaccagtatgggggggtgaacacgggacgccctgtaaccccgcctcgtact
gcccaagccccaaagaagaggtga
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