Coregonus clupeaformis (lake whitefish): 121548612
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Entry
121548612 CDS
T08357
Name
(RefSeq) integrator complex subunit 9-like
KO
K13146
integrator complex subunit 9
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121548612
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
121548612
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GFIT
Motif
Pfam:
IntS9_C
Lactamase_B_6
Beta-Casp
Beta_lactamase3
DUF4218
Motif
Other DBs
NCBI-GeneID:
121548612
NCBI-ProteinID:
XP_045065998
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Position
33:complement(10001799..10012210)
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AA seq
658 aa
AA seq
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MKLYCLSGHPTLPCNVLKFKSTTIMLDCGLDTTSVLQFLPLPLVHSPRLSKLPGWVSKDS
MINIEKELKVCAGRVFVDSQPEFCLPEKELLDLSTIDVILISNYHCMMALPYITEHTGFT
GTVYATEPTLQIGRLLMEELVNFMERVPKAQSATCWKNKEIQRLLPSPLKDAVEVSTWKR
CYSIQDVNSALSKVQLVGYSQKVELFGAVQVTPLSSGYSLGSSNWIIQSHYEKVSYVSGS
SLLTTHPQPMDQSALKNSDVLILTGLTQMPTANPDGMLGDFCSNLAMTIRAGGNVLVPCY
SSGVIYDLLECLYQFIENANLGSTPFYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEP
PFPHAELIQTNKLKHYPSIHGDFSSEFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTI
IFTEPDFSYLDALAPYQPLAMKCVYCPIDTRLNFHQVSKLLKEVQPLHVVCPEQYTQPPP
AQSHRSDLMLELQPPPMPYCRCSVLGLPFRRRWERIQLLPELAKSLVPSEIKPGISVATV
SAVLQSKDNKHTLQPVPKPPPLPPSKKRKRVVEEPPELLAPKPLLSGAVPLEAFLAMLHK
HGITEVKVEETAEGHILHLQAEDTLIQLEEDGTHIVCDNNEPLRTTLRDLVLRFLMKL
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgtactgtctgtcaggtcaccccaccctgccttgcaatgtcctaaaattcaaa
tccaccacaatcatgttggactgtggactggacaccacctctgtgctgcagtttcttcca
ctgcctctggtacacagcccaaggctttccaagctccctggatgggtgtctaaagacagc
atgataaacattgagaaggagctgaaagtgtgtgcgggtcgcgtctttgtggactcacag
ccagagttctgtctccctgagaaagagctgctggacctgtccaccatagacgtcatcctg
atctccaactaccactgtatgatggccctgccttacatcacagagcacacaggcttcact
gggactgtgtatgccacagagccaacgctgcagatcggcagacttctgatggaggagctg
gtgaacttcatggagagagttcccaaggcccagtctgccacctgttggaagaataaggaa
atacaaaggctgctccccagcccgctgaaggatgctgtagaagtgtcgacttggaagaga
tgctacagtattcaggatgtcaactctgctctcagcaaggtgcaacttgtgggctactcg
cagaaagtggagctgtttggcgccgtgcaggtcacacccctaagctctggctactcattg
ggtagctctaactggatcatccaatcacattatgagaaggtttcctatgtctctggctcc
tccctcctcaccacacatccacagcccatggatcagagcgccctgaagaacagtgatgtt
ctgattctgacgggcctcacacagatgccaaccgccaacccagatggcatgctaggggac
ttctgcagtaacctagccatgacgatccgtgcaggtggcaacgtgctggtgccatgctat
tcctcaggggtgatctatgatctcttggagtgtctttaccagttcatagagaacgccaac
ctgggctccacccccttctactttatctcacctgtggccaacagctctttagagttctca
cagattttcgcagagtggctctgtcacaataagcagtccaaggtctaccttccagaacct
cctttccctcacgctgagttgatccagaccaacaagttgaagcattaccccagtatccat
ggcgacttcagtagtgagttccggcagccgtgtgtggtgttcaccgggcacccgtctctt
cgcttcggggacgtggtacactttatggaactgtggggcaaatccagcctcaacactatc
atcttcactgaaccagacttctcctacctggatgcgttagccccttaccagccactggcc
atgaaatgtgtgtactgtcccatcgatactcgcctcaacttccaccaggtctccaagctg
ctcaaggaggtccagcctctccatgtggtgtgtccagagcagtacacccagcccccccca
gcccagtcccaccgctctgacctgatgctggagctgcagccccctcccatgccctactgc
cgctgctctgtgctgggcctgcccttcagacgccgctgggaacgcatccagctactgcca
gagctggccaaatccctagtgccctctgagatcaaacctggcatctccgtggcaaccgtg
tccgcagttctgcagtccaaggataacaagcatacgctgcagccggttcccaagccccct
ccgctgccccccagtaaaaagaggaagcgtgtagtggaggagcccccagagttgctggca
cccaaacccctgctcagtggagctgtacccctggaagccttcctagccatgctacataag
cacggcatcacagaagtgaaggtggaggagactgcggagggccacattctgcacctgcag
gctgaggacactctgatccagctggaggaggacgggactcacatcgtgtgtgacaacaat
gagccgctccgcaccactctcagggacctggtgctgcgcttcctcatgaaactctaa
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