Coregonus clupeaformis (lake whitefish): 121548632
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Entry
121548632 CDS
T08357
Name
(RefSeq) transcription termination factor 1 isoform X1
KO
K15225
transcription termination factor 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cclu03021
]
121548632
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
121548632
BRITE hierarchy
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
121548632
NCBI-ProteinID:
XP_041716085
LinkDB
All DBs
Position
Unknown
AA seq
785 aa
AA seq
DB search
MSLLSPKKLRVHFHHVFNQIEKIGYAASTMLGTSTSTEQGAIKNPVLLELSRTSPLLFEE
TPELISSVAPDTVEGCKKDKKKKKKTKALSERGPEEPAIEHNQKEVHQLTVKKRGKEPKH
KEQTVTELEVVEKERKKRKKGKEENQLNVVEDEMEVPDPEEQTGGKTKKKSKNLQTQQVG
EDGVTADEENMSSRKKKKKHNDIEPEGGIDRDLSKPAVDVSAVTVPDEARKSKKKHKNRQ
TDLEEGAESCQTVSRTADDAEIIELHTETVKRGKDVVTEVEENVNERRKRKKKKLRESQL
NDCPDKADLPGIKEQTERKLKSKRPKTDGGSAAVQGSGRKKEHSRESDKGMDSVHSQSAV
DVLDLTVPNDNRTHDAGTNGETEEGAHSTMVETGTQHNRPSLTEETLSVDDWQALNDLKE
FIPNVETKSVDEIRKMIKYDLDRFKEFRRQGLSLRSGRFNAQENKRLESNVYDFLALTGI
QSASKLFHPQHFKEEEANIKKLKSQHRFHERIAEGIPRPWHHVYIRGRKMFDGGNYMGRF
TKEELHSLKKLQTLHGNKWATISQLTGRSETALEKRFAQMSANRGAWTEEELKRLMEAVR
KHLVGQAEPGSGPAIIRKDKLYNNIPWTDVGQTVETRHWSQCRAKWLTVLKHKMAYEQPV
FSGGTKSLQGKVDLIKVLNAMQVEDAADIDWEEIAHTIGDVTPRYVQTHYYILKVAKVPL
WESRSFCEIIDFLNSRVLPKFEERLKVLIKSGEVVSRNDPQELFLLSEIFDNEEDSNYYS
EVENS
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttttgtcaccaaagaagttacgggttcactttcaccacgtgttcaaccagata
gagaaaataggttatgctgcatccaccatgctggggacttcgacatccactgaacagggg
gcaattaagaatcccgtattgcttgaattgtctcgaacatcccctcttttatttgaagaa
actcctgaattaatctcatcagtggcacctgatacagtcgagggatgtaaaaaagacaaa
aagaagaagaaaaagactaaagcactatctgaaaggggaccagaagaaccggcaattgag
cataatcaaaaggaggttcaccaattgacagtaaagaaaaggggtaaagaacctaaacat
aaagagcaaacagtgaccgagctggaagtggtggagaaagagaggaagaaacgtaaaaag
ggaaaggaagagaatcaactaaatgttgttgaagatgaaatggaggtaccagatcctgag
gaacaaactggagggaaaacgaagaaaaagtcaaagaatcttcaaacacaacaggtggga
gaggatggagtgactgctgatgaggagaatatgagtagcaggaagaaaaagaaaaaacat
aatgacattgagccagaaggggggatagatcgggacctctcaaagcctgcagtagatgtt
tcagcagtaacagtgccagatgaggccagaaagagtaagaagaagcacaagaacagacaa
acagatcttgaagagggagcggaaagctgtcagacagtttcaagaacagcagatgatgca
gaaatcatagaactgcacactgaaacggtcaagagaggtaaagatgtggtaactgaggta
gaggagaacgtaaacgagaggaggaaacggaagaagaaaaaactcagagagagtcaactg
aacgattgtccagataaagcagaccttccaggtataaaagaacaaactgaaagaaaattg
aagtcaaagaggccgaaaacggatggagggtctgcagctgtgcagggcagcgggagaaaa
aaagaacacagcagagagtcagacaagggaatggacagtgtccactctcagtctgcagta
gatgttttggatttaaccgttccaaatgacaacaggactcatgatgctggaacaaacggt
gagacagaggagggcgcccattcaaccatggttgagacagggacccaacacaacagaccc
agcctaacggaagaaactctaagtgtggacgactggcaggctctgaatgatctcaaagag
ttcattcccaatgtagagacaaagtcagttgatgagatccgtaagatgataaagtatgat
cttgatcgattcaaggaattccgaagacaaggcctttccctgcgaagtggaagattcaat
gcacaggagaacaaacgactcgagagtaacgtctatgacttcctggctctcactgggatt
cagagtgcctctaagctcttccatccacagcacttcaaagaggaagaagcaaatatcaag
aagttgaagagtcagcacagattccatgaaagaatagctgaaggaatacccaggccttgg
catcacgtctatatacgtgggaggaaaatgtttgatggcggcaactacatgggcaggttc
accaaagaagaacttcactctttgaaaaaactgcagacgttgcacggcaacaagtgggcg
acgatctcgcagttgactggccgaagcgaaacggcccttgagaaacgttttgctcagatg
tctgcaaacagaggagcgtggaccgaggaagaactgaaaagactaatggaagctgtgcgg
aagcacctggtgggacaggcagagcctggcagtggaccggccatcattaggaaagacaag
ctgtacaacaacatcccctggacagatgtgggccagacggttgaaacgcgccactggtcc
cagtgtcgagcaaaatggttgactgttttgaagcacaaaatggcatatgaacaaccagtg
ttcagtggaggcacgaaatccttacagggcaaagtggatttgatcaaagtgttgaatgca
atgcaggtggaagatgctgcagatatcgactgggaagaaattgctcacacaattggggat
gttactcctcgctacgtacagacgcattactacatactaaaagtagccaaagttccgttg
tgggagagcaggtccttctgtgagatcattgacttcctcaacagtagagttctccccaag
tttgaagagagactgaaagttctgataaaatcaggagaggtggtgtccagaaacgatcca
caagagctcttcctactctctgagatctttgataatgaggaggacagcaactactacagt
gaggttgagaacagttga
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