Coregonus clupeaformis (lake whitefish): 121548665
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Entry
121548665 CDS
T08357
Name
(RefSeq) homeobox protein OTX2 isoform X1
KO
K18490
homeobox protein OTX2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121548665
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
121548665
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
121548665
NCBI-ProteinID:
XP_041716118
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All DBs
Position
33:complement(12717028..12722763)
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AA seq
342 aa
AA seq
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MRGGGNSQLQLRFYRFRTELRRIQHLRTKINKGIFQRLFVFKILCNFALRSEARMMSYLK
QPQYTVNGLSLSASGMDMLHPSIGYPGAPRKQRRERTTFTRAQLDILENLFAKTRYPDIF
MREEVALKINLPESRVQVWFKNRRAKCRQQAQQSQSGAQSKTKPVKKRSSPMREASSESG
ASGQFTPPPSTSIPPVSSSTAPVSIWSPASISPLSDPLSTSSSSCMQRSYPMTYTQASGY
SQGYTGSSSYFSGMDCGSYLAPMHHQLSAAGSTMSPMGSNGVSSHLSPASSLSTPGYGAA
GLSFSGPTDCLDYKDQAAAWKLNFNTDCLDYKDQSSWKFQVL
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgagaggaggagggaactcgcagttgcaacttcgattctacaggtttcggacagaattg
agaagaatccaacacctgaggactaaaataaacaagggtatttttcaacgccttttcgtt
ttcaaaattctctgcaacttcgcccttcgatcggaggcaagaatgatgtcttatctgaag
cagccgcagtacacagtcaacggtctgagtttatctgcctccggaatggacatgctccat
ccgtctatcggctatccaggcgcccctcgtaaacagaggcgcgagaggacgacctttacg
cgcgcccagctggacattctggagaacttgttcgccaagacgcgctacccagacatcttt
atgcgcgaggaggtggccctgaagatcaatttacctgagtctcgtgttcaggtatggttt
aaaaaccgaagggcgaagtgtcgccagcaggcacaacagtcccagagcggcgcgcagagc
aagaccaaacccgtcaaaaagagaagttcccctatgagagaagccagctccgagagcggt
gccagcggccagttcacaccgccccccagcacctcaatcccgcccgtaagcagcagtact
gccccggtgtccatctggagcccggcctccatctcccctctctctgacccactctctacc
tcctcctcctcttgtatgcaacggtcctacccgatgacatatacccaggcgtccggatac
agccaaggctacaccggatcctcatcgtatttcagcgggatggactgcggatcttacttg
gcgcctatgcaccaccagctctctgcggcgggctccaccatgagccccatgggcagcaac
ggggtctccagccacctgagcccagcttcgtccctctccacgccagggtatggggcagcg
ggactgagcttcagtggtcccacagactgcctggattacaaggaccaggccgcagcctgg
aaactcaacttcaacacggactgtttggattataaagaccagtcctcgtggaaatttcag
gtgttgtga
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