Coregonus clupeaformis (lake whitefish): 121548684
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Entry
121548684 CDS
T08357
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121548684
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
121548684
BRITE hierarchy
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
LRR_5
ig
Ig_2
LRR_9
fn3
Sp38
DHU1_N
V-set
C2-set_2
Motif
Other DBs
NCBI-GeneID:
121548684
NCBI-ProteinID:
XP_041716140
LinkDB
All DBs
Position
33:12889939..12908954
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AA seq
813 aa
AA seq
DB search
METLLVYLMVLGMAIKGHKVQVCPKRCVCQMLNPNLATLCDKKGLLFIPPNIDRHTVEMR
LGDNFVTSIKQRDFANMTKLQDLTLSRNTIGSISPHAFKDLENLRALHLDSNRLTRLTND
TFSGMSKLQHLILNNNQLIHIHIGAFNDLTALEELDLSYNNLESAPWVAIQRMTSLHTLG
LDHNMLSYIPEGTFSGLQKLKRLDVTSNKLQKLPPDPVFQRAGVLATSGSMGPSSFALSF
GGNPLRCNCELLWLRRLRREDDLETCAAPQHLAGRYFWTVSEEEFLCEPPLITRHSQELR
ALEGQSVALRCKARGDPDPIIHWIAPDGRLMSNSSRAAVHSDGTLDILISTVKDSGSFTC
VASNPAGEAQQTVDLVIAKLPHITNSTVEKEPDPGSSDIATVTRTGGGGEGREVVPLGNT
ETSQEKKVVIAEATSTSALVRFNFQRSIPGIRMFQIQYNGTYDDSLVYRMIPPSSKSILV
NNLAAGTQYDLCVLAIYDDLVTSLTATRVVGCIRFTTDPQYLHCHFMQSQFLGGTIVVII
GGIIVASVLAFIIFLIVRYRVCNQGDEDKALEMGEIRSLSSDGQLQGCGVPKSISKSLSK
QILSPEKPEKEDKECLRVGLPPPEPVKQQRPPAPTTTTSNKPSIPDCTVSTSAASHPWHP
ASPGTLRPKRASGGMKLGEACRTEGQTDVELENTNRNNSAEAKMAVAVSALSTKWTKVAR
GPSPPGASSLHYMTVPAGGVRVNRRHSLNVDSYKECCYVSLVQQQQPKPGGGLRSKRSLS
MSGELPQLESAMANIRRGRDKLSRSERLLESTL
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggagaccctgctagtttacctgatggtccttggcatggctataaaaggccacaaggtc
caggtgtgcccaaaacgctgtgtctgccagatgctcaaccccaaccttgcaaccctctgc
gacaagaagggcctcctcttcatcccgcccaacatcgaccgtcacaccgtggagatgcgt
ctgggcgacaactttgtcacgagcatcaaacagcgggacttcgccaacatgaccaagctg
caggacctgacgttgtctcggaacaccatcggctccatctcacctcacgcctttaaagat
ctggagaaccttagagccttgcatctggacagcaaccgtctgacgaggctcaccaacgac
accttcagtgggatgtccaagctccaacatctcatcctcaacaacaaccagctgattcac
atccacatcggggccttcaatgatctcacggctctagaggagttagatctgtcctacaac
aacttagaaagcgccccctgggtggccatccagagaatgaccagcctccacaccctgggc
ttggaccacaacatgcttagctacatccctgagggaaccttctccggcctgcagaagctc
aaacgccttgacgtcacatccaacaagctccagaagcttccgcccgacccagtgttccaa
cgggccggcgtcttggccacgtcagggagcatgggtccatcgtcatttgcgttgagtttt
ggtgggaacccactgaggtgtaactgtgagctgctgtggctgaggaggctgaggagggaa
gatgatctggagacatgtgcggctccgcagcacctggctgggcggtacttctggaccgtg
tctgaagaagagttcctctgtgagccccctctcatcaccagacactcccaggagctgcga
gcattggagggtcagagtgtagctctgcgctgtaaggccaggggcgacccagaccccatc
atccactggatcgccccagatggccggctcatgtccaactcctcccgggctgcggtgcac
agtgatgggaccctggacatcctcatcagcactgtgaaggactcaggctccttcacctgt
gttgcctccaacccggccggggaggcccaacaaactgttgacctggtgatcgccaaactc
ccacacattaccaacagtactgtggagaaggaaccggacccaggttcttctgatatcgcc
acggtaacgaggacgggtggtggtggggaaggcagagaagtggtgccactgggaaacaca
gagacgagccaggagaagaaggtggtgattgctgaggccacgtctacctccgccctggtc
aggttcaacttccagaggagtataccgggcatccgaatgttccagatccaatacaacggt
acctacgatgactctctggtttacagaatgatccctccgagcagtaagagtatcctggtg
aacaacctggctgccggtacacagtacgacctgtgtgtgctggccatctacgacgacctg
gtgacctccctgaccgccacgcgggtggtggggtgcattcgcttcaccaccgatccccag
tacctccactgccacttcatgcagtcccagttcctgggagggaccatagtggtcatcatc
ggagggatcattgtggcgtccgtcttagccttcatcatcttcctcatcgtgaggtaccga
gtctgtaaccaaggcgatgaggataaggctttggaaatgggtgagatccggtctctgagc
agtgatggtcagctccagggctgcggcgtccccaagtccatttccaagtctctgtccaag
cagattctcagtccggagaaaccagagaaggaggataaggagtgtctgagggtgggcctt
cctccccctgagccagtcaagcagcagcgacccccagccccgaccaccaccacatccaac
aagccctccattcccgactgcaccgtctctacctccgcagccagccacccctggcaccct
gcctccccgggcaccctgaggccaaaacgggccagtggcggtatgaaactgggagaagcc
tgccgaaccgaaggccagacagatgtggagttagagaacacaaaccggaataactcagcg
gaagctaaaatggctgtggctgtttctgccctttccacaaaatggacgaaggtcgctagg
gggccaagcccccctggagcctcctccctccattacatgacagtgccagcagggggcgtg
agggtgaaccggcggcactctttgaacgtggactcatacaaggagtgctgctacgtcagc
ctggtacagcagcagcagccaaagcctggtgggggtttgcgctccaaacgcagtctgtcc
atgagcggagaactgccccagttggaaagtgcaatggcaaacatacgcagaggcagagac
aagctgtcccgatccgagaggcttctcgaaagcactctatga
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