Coregonus clupeaformis (lake whitefish): 121548716
Help
Entry
121548716 CDS
T08357
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1 isoform X1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
121548716
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
121548716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDPD
CBM_20
C2_GDE1
TreTu_C
KGK
Motif
Other DBs
NCBI-GeneID:
121548716
NCBI-ProteinID:
XP_041716183
LinkDB
All DBs
Position
33:17596811..17628862
Genome browser
AA seq
687 aa
AA seq
DB search
METTQVTLTVRGDTSPGEVIAVVGSCEALGGWCHQRAVILQPAEHDGTLWKRIISVPRGA
VSTYRYFKGHFLESKSAGGPCQVIVTKWETHQQPRLMSPTESHLDIDSGQFGFNNGLQCV
DSGWLTCQTEIRLRLHYSKTSPVSITKKKYKKSRFRIKLTLEGVEEEEEEDEEQEQSAVA
WHKMTTTLETSMISGDGYKSRHSQPECGYALEASQWTEYIIHTMDPDNLELTFDFFEEDM
GEHVVPGDAHPGTVGTACLLSSFFVESGKDTGVVTLPIMKRNSRQTLGKVRVDYLVIRPI
EGLQCDMSSSFTKYWRKRSAPLDVGHRGAGSTHAAKHTKVRENTIASFKSAANHGAAYVE
FDVHLSKDCVPIVYHDLTCCISTKKKGDKHSLELFEVPVKDLTYNQLQQLKLGHASSLKV
NDHKDDDEEEEVDEHQPFPSFSQIFQAVPENVGFNIELKWVCQMKDGSWEGNLSSYFNMN
LFLDIILTCVLQRAGKRRIVFSCFDPDVCTMVRQKQNKYPILFLTQGISEKYPELMDIRC
RTTQIAMSFAQSENLLGISAHTEELLQNLEHIREAQSKGLVVFCWGDLNNDHDNRTKLRE
QGIDGLIYDRICDDPVEQPNIFKVEEQHTLQETLKSFVCSCYTIPCQAAPVCTSYTIPCQ
AAPVCTSYTSSKEHNGSAESDSGLSSS
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggagacaactcaagtgactttgacagttaggggagacacatccccaggtgaggtgata
gctgtggttggtagctgtgaagctttaggaggctggtgccatcagagagcggtgatccta
caacctgctgaacacgatggcacattgtggaagaggatcatcagtgtgcccagaggtgct
gtgtcaacctatcgctatttcaaaggacacttcctggagtcaaagagtgcaggtggtccc
tgtcaggtgatagtcactaagtgggagacccatcagcagccacgcctgatgagccccaca
gaatcacaccttgatattgacagtggccaatttggattcaacaatggcttacagtgtgtg
gactctgggtggctgacgtgccagacagaaatccgtttgcgtctgcactactcaaagacg
tctcctgtatccattaccaagaagaaatataagaagtctcgtttcaggatcaagctgaca
ctggaaggtgtagaagaggaggaggaggaggatgaagagcaggagcagagcgcggtggcg
tggcacaagatgaccaccacgctggagaccagtatgatcagtggagatggatacaagtcc
cgccactcccagcctgagtgtggctacgccctggaggcctcacagtggacagagtacatc
atccacaccatggaccctgacaacctagaactcaccttcgacttctttgaggaggacatg
ggtgagcatgtggtgccaggggatgcccacccggggaccgtgggtacggcctgccttctc
tcctcattctttgtggaaagtggcaaggacacgggtgtggtcactctgcccatcatgaaa
cgcaactccagacagaccctgggcaaagtcagagtggactacctggtgatccgtcctatc
gagggactgcagtgtgacatgagctcctccttcacaaagtactggaggaagaggagtgcc
cccctggacgtaggccacagaggggctggcagcacacacgcagccaaacataccaaagtt
agggagaacaccattgcctcgtttaaaagtgctgccaatcatggggctgcctatgtagag
tttgacgtccatctctccaaggactgtgtccccatcgtgtaccacgatctcacttgctgc
atctccactaagaagaaaggagacaagcactctctggagctgtttgaagttccagtcaaa
gacctcacatacaaccagctacaacagctcaagttgggccatgcttcttccttgaaggtg
aacgaccacaaagatgatgatgaagaggaagaggttgacgagcatcagcccttcccttca
ttctcacagatattccaagcagtgcctgaaaatgtgggcttcaacatcgagctgaagtgg
gtttgtcagatgaaggatggttcgtgggaaggaaacctgtcatcctacttcaacatgaac
ctgttcctggacatcatactgacctgtgtgctgcagagagccggcaagagacgcatcgtc
ttctcctgcttcgaccctgacgtctgcaccatggttcgtcagaagcagaacaagtacccc
atcctgttcttgacccagggcatctctgagaaataccctgagctcatggacatccgctgt
cgcaccacacagatcgccatgagcttcgcacagagcgaaaacctcctgggtattagtgcc
cacactgaggagctccttcagaacctggagcacatccgagaggcccagtctaaaggcctg
gtggtgttctgctggggagacctcaacaacgaccacgacaacaggaccaagctacgggaa
cagggcatcgatggactcatctacgacaggatctgtgacgacccggtcgagcagccgaac
atcttcaaagtagaggagcagcacacgctgcaggaaacgctcaagagctttgtgtgctcc
tgctacaccatcccctgccaggcggcgcctgtctgcacctcctacaccatcccctgccag
gcggcgcctgtctgcacctcctacacctcctccaaggagcacaacggcagtgcagagtct
gactctggcctcagctcctcctga
DBGET
integrated database retrieval system
