Coregonus clupeaformis (lake whitefish): 121548728
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Entry
121548728 CDS
T08357
Name
(RefSeq) RNA polymerase II-associated protein 3 isoform X1
KO
K23002
RNA polymerase II-associated protein 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cclu03021
]
121548728
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
121548728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
RPAP3_C
TPR_2
TPR_8
TPR_19
TPR_11
TPR_16
TPR_BSK1_C
TPR_12
TPR_17
TPR_9
ARM_TT21_4th
ANAPC3
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
121548728
NCBI-ProteinID:
XP_041716207
LinkDB
All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
MVGMSENKSIELQLQMRQNAEDLHNFMKDLDSWETDIKKKDEQLRTGSIGESQKILPPVR
NKDFKKKKEKKKASDNNAKTEPKQAPRIKSYDYQSWDKFDVDKVLESMDKEDSAAESNDS
ESEDSGVPATDQDKALAEKEKGNQLFKEGKYDDAIECYTRGMGADPYNPILPTNRATCFL
RLKKFAVAESDCNLSIALDSNYFKAFARRGAARFALQNYESALEDYVMVLKLDPGNLEAQ
NEVMKCKEVIAKLGGKAESPEAAVVVPPVVDVKQQQLMEEQHRRQEAVVQKDRGNAYFKE
GKYETAVEYYTKGMEADSTNVLLPANRAMAYLKLQRYVEAEEDCSKAIALDGTYSKAFAR
RGTARAALGLLKQAKEDFEEVLKQEPGNKQAFHEMKKIAIDMGTSGLLATEEHAQRRTVQ
PINKPPHLQSTKPLRRVDIEEVGGKILVQEEPSAVLTSTTAPRVRPQKTTSIADTVREGQ
GEASPPSTSPSAKILKIEEISNVSSHSPVKGLEGDTVRAQTQKHREATVSEPTEPPATPS
SSTEVVPPAPANSFQLEADLRKIGNGPEVIYKYLKQIEPQAYAKIFQSSLEPDMLNQILR
TLQSFYIKNEEPPVILEILRSLAGVRRFDMAVMFMSSPEKKVLQELFDFLLQAGLEDTSV
GALRKKYGV
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggtaggcatgtctgaaaacaaatccattgaactccaactgcaaatgcgacaaaatgca
gaggacctgcataacttcatgaaagatcttgacagctgggaaaccgacataaagaagaag
gatgagcaactaagaactgggagcattggcgagtctcaaaaaatcctcccaccagtgcga
aacaaggacttcaaaaagaagaaggagaagaagaaggcatcagacaacaatgcaaagact
gaaccaaaacaagcacccaggataaagtcttatgactatcagtcatgggacaaatttgat
gtggacaaggttttggagtccatggataaagaggacagcgctgctgagtccaatgactct
gaatctgaggattctggggttcctgctactgaccaagacaaagctcttgctgagaaggag
aaaggtaatcagctgtttaaagaagggaagtatgatgatgccattgagtgttacaccaga
ggcatgggcgcagacccttataaccccattctgcctacaaaccgagctacctgcttttta
agactcaaaaagtttgctgttgccgagtctgactgcaacttgtccatcgctctggacagt
aactacttcaaagcatttgcacgaagaggagcggctcgattcgccctccaaaattatgaa
tctgccctagaagattatgtaatggttctcaagctagatcctgggaacctggaggcacag
aatgaagtgatgaaatgtaaagaggtcattgctaaactgggtgggaaggcagaaagccca
gaggctgcagtggtggtgccacctgttgtggacgtcaagcaacagcagctcatggaggaa
cagcatagaagacaagaggcggtggtgcagaaagacagggggaacgcatacttcaaagag
gggaagtatgagacagcagtagagtactacaccaagggcatggaagcggacagcaccaac
gtcctcctgcctgccaaccgggccatggcttacttaaagctgcagagatatgtagaggct
gaggaggactgcagtaaagccatagccctggatggcacctactcaaaggcctttgcccgc
agagggacagccagggctgctctgggactgctcaaacaagctaaagaagattttgaagag
gtcctgaagcaggaaccgggaaacaagcaggcatttcatgagatgaagaagatcgccatt
gacatgggcaccagtggtctgctggcaacagaggagcacgcacagcggagaacagtacag
ccaattaacaaaccacctcacctgcagtcaaccaagccgttgaggagagtggacattgag
gaggttggtggaaagatcctggtccaggaggagccctcggctgtgttgacctcaaccaca
gccccccgtgttaggccccagaagaccacctccatcgcagacactgtgagagagggtcag
ggtgaggcctcacctccctctacctcccccagcgctaagatcctgaagattgaagagata
tcaaacgtctcctcacattcccctgtcaaagggcttgagggggatactgtgagagcacag
acacagaagcacagggaggcaaccgtcagtgaaccaacagaaccgcctgctacaccctcc
tcctcgacagaggtcgtacctcctgcccccgccaacagcttccagctagaggcagacctc
aggaagattggaaatggccctgaagtcatctacaagtatttgaagcaaatcgaacctcag
gcgtacgccaagatcttccagagctctcttgaaccagacatgctcaatcagattctaagg
acgttacaaagcttctacatcaagaacgaagagccacctgtcatactggagatcctcagg
agtctggccggtgtgaggcgattcgacatggctgtcatgttcatgtccagccctgagaag
aaagttctacaagaactgtttgactttcttcttcaagctggacttgaggacacttcagtt
ggagccctgcgaaagaagtatggagtgtga
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integrated database retrieval system
