Coregonus clupeaformis (lake whitefish): 121548785
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Entry
121548785 CDS
T08357
Symbol
esr1
Name
(RefSeq) estrogen receptor isoform X1
KO
K08550
estrogen receptor alpha
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
121548785 (esr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121548785 (esr1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cclu03310
]
121548785 (esr1)
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
121548785 (esr1)
Nuclear receptors [BR:
cclu03310
]
3. Estrogen like
3A. Estrogen receptor
121548785 (esr1)
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GFIT
Motif
Pfam:
Hormone_recep
Oest_recep
zf-C4
zf-C17orf113
Motif
Other DBs
NCBI-GeneID:
121548785
NCBI-ProteinID:
XP_041716286
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Position
33:21894594..21923991
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AA seq
623 aa
AA seq
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MLVRQSQTQISKPLGAPLRSRTTLESHAIFLPKRSPQQPTTPNSNMYPEETRGGGGGGAA
ALNYLEGGYDYTAPAPGPAPLYYSTAPLDAHGPPSDGSLQSLGSSPTGPLVFVSSSPQLS
PFLHPPSHHGLPSQSYYLETSSTPLYRSSVVTNQQSASQEKLCIASDRQQPFAAAGSGSG
IGVFEMANETRYCAVCSDFASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTMDRN
RRKSCQACRLRKCYEVGMVKGGLRKDRGGRVLRKDKRHCGPAGDREKPYSDLEHRTAPPQ
DGGRNSSSSSLNGGGGWGGPRITMPPEQVLFLLQGAEPPALCSRQKVARPYTEVTMMTLL
TSMADKELVHMIAWAKKVPGFQELSLHDQVQLLESSWLEVLMIGLIWRSIHSPGKLIFAQ
DLILDRSEGDCVEGMAEIFDMLLATVSRFRMLKLTPEEFVCLKAIILLNSGAFSFCSNSV
ESLHNSSAVESMLDNITDALIHHISHSGASVQQQPRRQAQLLLLLSHIRHMSNKGMEHLY
SIKCKNKVPLYDLLLEMLDGHRLKSPGKVAQAGAQTEGPSTTTTTSTGSSIGPMRGSQDT
HIRSPGSGVLQYGAPRSDRRPIP
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcagacagtcccagacacagatttccaaacctctcggagctcctctcagatcc
cgaacgaccctggagagccacgccatcttccttccgaaacgctcaccacagcagccgacc
acccccaacagcaacatgtaccctgaggagacacgcggcggtgggggtggaggggcggct
gcccttaactacctggagggagggtatgactacacagcccctgccccaggcccagccccc
ctctattactccaccgcccccctggatgcccacggacccccctcggatggcagcctgcag
tccctgggcagcagtcctaccggccccctggtgtttgtgtcctccagcccccagctcagc
cccttcctccaccccccaagccaccatggtctccccagccagtcatactacctggagacc
tcttccacacccttatacaggtcgagtgtggtaaccaatcagcagtcagcgtcccaggag
aagctctgcatcgcctccgataggcagcagccgttcgctgcagcaggttcagggtcaggg
atcggggtgtttgagatggccaacgagacgaggtactgtgcggtctgcagcgactttgcc
tctgggtaccactacggagtttggtcctgcgagggctgcaaagccttcttcaaaaggagc
attcaaggtcacaatgactacatgtgccctgcgaccaaccagtgtacaatggacaggaac
cgtaggaagagctgccaggcatgccgcctcagaaagtgttacgaagtggggatggtaaaa
ggaggcttgcgtaaggaccgtggtgggagggttctccggaaggataagcgacattgtggt
cctgctggtgacagagagaaaccctacagtgacctggagcacaggacagcgccccctcag
gacgggggtaggaacagcagcagcagcagcctcaatggtggtggaggatggggcgggccc
agaatcaccatgcctcctgaacaggtgctgttcctgctgcagggagcggagccaccggcc
ttgtgttctcgtcagaaggtggcccgcccctacacagaggtcaccatgatgaccctgctc
accagcatggccgacaaggagctggtgcacatgatcgcctgggctaagaaagtaccaggt
ttccaggagctgtctctccatgaccaggtgcagctgctggagagttcctggctggaggtg
ctgatgatcggactcatatggaggtccatccacagccctgggaaactcatcttcgcccag
gacctcatactggacaggagtgaaggagactgtgtggagggcatggctgagatcttcgac
atgctcctggccactgtgtctcgcttccgcatgctcaaactaacgcctgaggagtttgtg
tgcctcaaagccatcatcttgcttaactctggtgccttctccttctgttccaactctgtg
gagtcccttcacaacagctcggcagtggaaagcatgctggacaacatcactgacgccctc
atccaccacatcagccattcaggagcctctgtgcagcagcagcccagacggcaggcccag
ctcctgctcctgctctcacacatcagacatatgagcaacaaaggcatggagcacctttac
agcataaaatgtaagaacaaagtgcctctgtatgacctgctcctggagatgctggatggt
caccggctcaaatccccaggcaaagtggcccaagctggggcacagaccgagggcccctct
accaccactaccacctccacaggctccagcatagggccaatgcgaggcagccaggatacc
cacatcagaagccctggttcgggggtactccagtatggcgccccccgctcagaccggagg
cccattccgtga
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