Coregonus clupeaformis (lake whitefish): 121548813
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Entry
121548813 CDS
T08357
Name
(RefSeq) prospero homeobox protein 1 isoform X1
KO
K20211
prospero homeobox 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121548813
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain PROS
121548813
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HPD
NifQ
DUF629
Collagen
RMI1_N_C
WDCP
Motif
Other DBs
NCBI-GeneID:
121548813
NCBI-ProteinID:
XP_045066146
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Position
33:23246014..23290660
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AA seq
827 aa
AA seq
DB search
MPDHDSDSLLSRQTKRRRVDIGVKRTVGSNATNTAAATTSTDIACAKAAIFSAMNSLNSH
HHGSDADSMDCSMVQPHGPTGVVTATDNDSKSNVLRKLLKRANSYEDAMMPFPGATIISQ
LLKSNMAKNGGERGERGERGERGERGERGERGERRDGGFPGSGLSSGGSEAPQEDACSNS
SQDSPQECLSPFGRPSALGAFDLERLNDEHLRAKRARVENIIRGMSHSPSVLVPARHLGE
RDREREQREREREREMDGDREMEMDCPPQPPSPRGEVCSRENKRKQRLPQQQQQSFTQLV
CQRKEQKQEERRQLKLQLEDMQKQLRQLQEKFFQIYDSTDDSEHDLAHDLGNMSEDSAGR
SDAGGDDRADRSDNEMSDLDPGHFLDRARALLQEQALLAEGDKPRREGLVRGKGPGQGPS
SSMHHAEGKQLAETLKQELNSAMNQVVDTVVKVFAKPPRPAPPQVFSPLPMPPERFGVNG
EGPNFHTANQRLQCFGDVIIPNPLDSFGGMPMPGANDQTEALPLVVRKTPSEHHHQSSAV
GAHGGHHHPSLHPSSLSASMGFSPPSFRHPFPLPLMGYPFPSPLGPPSGGYPGKDHSTPD
SMDLSRETTSLRTKMSSGHHMGHHHRSLSPTHPGSTAEGLSLSLIKSECGDMSDMNDISP
YSGSTIQEGLSPNHLKKAKLMFFYARYPSSNMLKMFFSDVKFNRCITSQLIKWFSNFREF
YYIQMEKFARQAINDGVTGVEEMSVSRDCELYRALNMHYNKANDFEVPERFLEVAQITLR
EFFNAIVAGKDVDPSWKKAIYKVICKLDSEVPEVFKSPNCLQELLHE
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgccggaccatgacagcgactccctcctgagcagacagaccaagagaagacgagtggac
atcggtgtgaagaggaccgtgggcagcaacgccaccaacacagcagcagctacaaccagc
accgacatcgcctgcgccaaagcagccatcttcagtgccatgaactctctcaactcccac
caccacggctccgacgcagactccatggactgttccatggtgcagccacacggccccact
ggggtcgtcacagcaaccgataacgactccaagtccaacgtgctccggaagctcctaaag
agagccaactcgtacgaagacgccatgatgcccttccctggtgccaccatcatctcccag
ctcctcaagagcaacatggccaagaatggaggagagagaggggagagaggagagagaggg
gagaggggggagagaggggagaggggggagagaggagagagaagagacgggggattcccc
gggtcgggcctctccagtgggggttccgaagccccccaggaggacgcctgcagtaactcg
tctcaggacagcccccaagagtgcctgtcccccttcggccgcccttcggctctgggcgcc
ttcgacctggagcgcctcaacgatgagcacctccgggccaagcgcgcccgcgtggagaac
atcatccggggcatgagccactcgcccagcgtgttggtgcccgcacgccacctcggagag
cgggaccgtgaacgggaacaacgtgaacgggagagggagcgagagatggacggggacagg
gagatggagatggactgccccccacagccgcctagccccaggggagaggtgtgcagcaga
gagaacaagaggaagcagcgccttccccagcagcagcaacagagcttcacccagctggtg
tgccagcgtaaagagcagaagcaagaggagcgcaggcagctgaagctgcagctggaagac
atgcagaagcagctgcgccagctgcaggagaagttcttccagatctatgattccactgac
gactctgagcacgacctggctcacgacctgggcaacatgtctgaggacagcgccgggagg
tccgatgccggcggagatgaccgagcagaccgctctgacaacgagatgtcagacctggac
ccaggacacttcctggaccgggccagggcattgctccaggagcaggccctgctggcggag
ggggacaagcccaggagagaggggctggtccgggggaaaggtcctggtcagggtccctcc
tcctccatgcaccatgcggagggcaagcagctggctgagacgctgaaacaggagctcaac
tcagccatgaaccaggttgtggacacagtggtcaaggtgttcgccaagcccccgcgcccc
gcacccccccaggtcttctcgcccctccccatgcccccagagaggtttggggtcaacggt
gagggccctaacttccacacagctaaccagcgcctgcagtgctttggtgacgtcatcatt
cccaaccccctggactcgtttggtggcatgcccatgcctggcgccaacgaccagacagag
gcactgcccctagtggtgaggaagactccgtcagagcaccatcaccagtcctcagctgtg
ggcgcccacgggggccaccaccacccctccctgcacccctcctccctctctgcctccatg
ggcttcagccccccttctttccgccaccccttccccctgcctctcatgggctaccccttc
ccaagccccctgggcccaccctctgggggatacccagggaaggaccactccaccccagac
tccatggacctgtccagggaaaccaccagcctgcggaccaagatgtcttcggggcaccac
atggggcaccaccaccggtcgctatctcccacccaccccgggagcaccgcagaggggctc
tccctgtccctcatcaagtcagagtgtggagacatgagcgacatgaacgacatctcacca
tactcaggcagcactatccaggagggtctctcccccaaccacctgaagaaggccaagctc
atgttcttctacgctcgttaccccagctccaacatgctcaagatgttcttctccgacgtc
aagtttaaccgctgcatcacgtcccagctcatcaagtggttcagtaacttccgggagttc
tactacatccagatggagaagtttgcccggcaggccatcaacgacggtgtcaccggggtc
gaggagatgagcgtcagccgcgactgcgagctctaccgagccctcaacatgcactacaac
aaggccaacgactttgaggttccagagcggttcctggaggttgctcagatcacgctgcgc
gagttcttcaatgccatcgtggcgggcaaagacgtggacccatcctggaagaaagccatc
tacaaggtgatctgcaagctggacagcgaggtgcccgaggtcttcaagtcgcccaactgt
ctccaggagcttctacacgagtaa
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