Coregonus clupeaformis (lake whitefish): 121548842
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Entry
121548842 CDS
T08357
Name
(RefSeq) vascular endothelial growth factor A-A isoform X1
KO
K05448
vascular endothelial growth factor A
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04020
Calcium signaling pathway
cclu04370
VEGF signaling pathway
cclu04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121548842
04370 VEGF signaling pathway
121548842
04020 Calcium signaling pathway
121548842
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121548842
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cclu04052
]
121548842
00536 Glycosaminoglycan binding proteins [BR:
cclu00536
]
121548842
Cytokines and neuropeptides [BR:
cclu04052
]
Cytokines
Growth factors (RTK binding)
121548842
Glycosaminoglycan binding proteins [BR:
cclu00536
]
Heparan sulfate / Heparin
Growth factors/receptors
121548842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
VEGF_C
Presenilin
Motif
Other DBs
NCBI-GeneID:
121548842
NCBI-ProteinID:
XP_041716389
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All DBs
Position
33:24412255..24432651
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AA seq
289 aa
AA seq
DB search
MLWKKSQDDRMDFKSTFAFGISIMNFVDSLITLFLLTLLYLSAVKSAHIPKEGWRISHDG
APGYNVFSASVQKVPSFVGLREGEKEGVSTEAYQSHSVRGKERDTLMVISFMEVYNKSLC
QPRELLVEIAQEYPEEVEHIFIPSCVVLTRCAGCCNDEMLQCTPTSTHNVTMEIKRIKPQ
RQQNDIFMSFTEHSACECRPKKEVKEQREKKPRKDKGKGQKRKRKKNHDQKNGEAQCEPC
CDGCSERRKQGFIQDPLTCQCSCRNSNAHCRARYLELNERTCRCDKPRR
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgctttggaagaaatcgcaagacgaccgcatggattttaaatcgacatttgcatttgga
atttcaatcatgaactttgttgacagtttgataaccttatttctcctgacgcttctgtat
ttgtcagctgtcaagagtgcccacataccgaaagaaggatggaggatttcgcatgacggc
gccccaggctacaatgtttttagtgcttcagtgcagaaggtaccaagctttgtggggctg
agagagggagagaaagagggagtcagtacagaagcataccagagccacagtgtgagagga
aaggagagagacaccttgatggtgatatccttcatggaggtgtacaataagagcctgtgt
cagcccagggagctgctggtagagatcgcacaggagtacccagaggaggtagaacacatc
ttcatcccgtcctgtgtggtgctgacacgctgcgcaggctgctgcaatgacgagatgcta
cagtgtactccaacctccacacataacgtcaccatggagataaaaagaataaaaccccaa
aggcaacaaaatgatatctttatgagttttacagaacacagtgcatgtgaatgcaggcca
aagaaagaagtgaaagaacagagagaaaaaaaaccccggaaagacaagggcaaaggccaa
aagagaaagcgaaagaaaaaccatgaccaaaagaatggtgaagctcagtgcgagccatgt
tgtgatggctgttcagagaggaggaagcaggggttcatccaggaccctctgacctgccag
tgttcctgcagaaactccaacgcccactgcagggcgcgttacctggagctcaacgagagg
acctgcagatgtgacaagccgagaagatga
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