Coregonus clupeaformis (lake whitefish): 121548862
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Entry
121548862 CDS
T08357
Name
(RefSeq) tumor necrosis factor receptor superfamily member 21
KO
K05157
tumor necrosis factor receptor superfamily member 21
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121548862
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
cclu04050
]
121548862
04090 CD molecules [BR:
cclu04090
]
121548862
Cytokine receptors [BR:
cclu04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
121548862
CD molecules [BR:
cclu04090
]
Proteins
121548862
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Death
CARD
Motif
Other DBs
NCBI-GeneID:
121548862
NCBI-ProteinID:
XP_041716417
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Position
33:complement(14809683..14857081)
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AA seq
657 aa
AA seq
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MLWTISVLCMSVALLYSVVDEASSQPLTPSRGTVTKALSARRYYHTDPSTGIQLVCDKCP
AGTFVSRHCTQTNVRDCSRCDEGTFTHGENGVQHCHRCRRPCRAPLVEKVPCTATSDRIC
TCPPETFAQGDSCTAHSLCPVGSGVKKRGNDVEDVRCKACARGSFSDMVSSVLRCRTHTD
CLAQGLPLLAAGTRETDNICGPASPTSPTLLRPAQSAFVQEPSSSSSSAGPVHKDNFSLT
AGAEDLELLMSATGILPSPSHGQDSPPAGSSEDNGEVLNLDATPGALDSPRTLPHHKYSV
PSDNHRTHLAANKRAMDGVEDGAGVGVGRGVQSSGYRPTWRGSPRPSTHMHFDINEHLPW
MIVLLLLLVLVVIVVCSVKRSSRVLKKGPVQDPSSIIEKAIQKKTCPPTQTKEKWIYYSN
GQGVDILKLVAAQIGSQWIDMYQSLANATEREVAAFSNGYQSDQERAYAALQHWTIRDGD
ANLAKLINALHRHRRIDVVEKIRGIMEDNPQFNLNQLMTVNVTPSHSPVHKSLESPGVMV
ERSPVDRTKGFFPDESEPLLRCDSTSSKDSALSRTGSFITKEKKDTVLRQVRLDPCDLQP
IFDDMLHILNLDELHVIEAIPMAEDKLDRLFEIAGVKSQEASQTLLDSVYSHLPDLL
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgctctggacaatttcagtgctttgtatgtctgtggcgctactgtacagtgtggttgat
gaggcctccagccagcctctgacacccagccgaggcactgtgacaaaggccctgtctgcc
cgccgctactaccacacagaccccagcacaggcattcagctggtctgtgacaagtgcccc
gcgggcaccttcgtgtccagacactgtacccagaccaacgtgagggattgcagccgctgt
gacgagggcacattcacgcacggagagaacggggttcagcattgccaccgctgcaggagg
ccctgccgcgcgcccctcgttgagaaggtcccctgcacggccacctcagaccggatctgc
acctgccctccagaaaccttcgcccagggcgacagctgcacggcccactctctgtgccct
gtgggctcaggggttaagaagaggggcaacgatgtggaggatgtgcgatgtaaggcatgc
gcaagggggagcttctcggatatggtctccagtgtgttgaggtgcaggacacacacagac
tgcctggcccagggtctgcccctactggcagcgggcactagagagacagacaacatctgt
ggacctgcttctcccacctcccccacccttctgagacctgcacagtctgccttcgtccag
gagccctcctcttcctcctcctcagctggcccagtacataaagacaacttcagcctgaca
gcaggtgctgaggacttagagctcttaatgagtgccacagggattctacccagccccagc
catggccaggattcccccccagcaggctcctccgaagacaatggagaggtcctgaacctg
gacgctacgcctggagcactggactccccacggactctaccacaccacaagtactctgtt
cccagtgataaccaccgcacccacctggcggccaacaagcgggccatggatggcgtggag
gatggagctggtgtgggggtgggcagaggggtgcagagctcagggtacaggcccacgtgg
agaggctcccccaggcccagcactcatatgcactttgacatcaacgagcacctgccctgg
atgatcgttctgttgctgctgctggtgctggtggtgattgtggtgtgcagcgtgaagagg
agctccagagtgctgaagaaggggccagtccaggaccccagcagcatcattgagaaggcc
atccagaagaagacctgtcccccgacacagaccaaggagaagtggatctactactccaac
ggacagggtgtggacatcctgaagttggtggcagctcagattggcagccagtggatcgac
atgtaccagtccctggccaatgctacggagcgtgaggtggcagccttctccaacggctac
cagtcggaccaagagcgggcatacgctgcactgcagcactggaccatccgcgatggggac
gccaacctggccaagctcatcaacgccctgcaccgccaccgccgcatcgacgtggtggag
aagatacggggcatcatggaagacaatcctcagtttaatctgaaccagctgatgactgtg
aatgtaaccccgagccacagtcctgtccacaagtctttggagtctcctggggtgatggtg
gagcggtctcctgtggaccggaccaagggcttcttccctgacgaatcagagcccctgctc
cgctgtgactctacttccagcaaagactccgccctcagcaggaccggctcattcattacc
aaagagaagaaagacacggtgctgcgtcaggtccggctggacccgtgcgacctgcagccc
atcttcgacgacatgctgcacatcctaaaccttgacgagctgcacgtcatcgaggcgatc
cccatggcagaggacaaactggatcgcctcttcgagattgccggggtcaagagccaggag
gccagccagaccctgctggactcggtctacagccacctgcctgacctcctatag
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