KEGG   Coregonus clupeaformis (lake whitefish): 121548892
Entry
121548892         CDS       T08357                                 
Symbol
gtf3c2
Name
(RefSeq) general transcription factor 3C polypeptide 2 isoform X1
  KO
K15200  general transcription factor 3C polypeptide 2
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cclu03021]
    121548892 (gtf3c2)
Transcription machinery [BR:cclu03021]
 Eukaryotic type
  RNA polymerase III system
   Basal transcription factors
    TFIIIC
     121548892 (gtf3c2)
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_WDR36-Utp21_1st Beta-prop_EIPR1 WD40_Prp19 WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_NOL10_N ANAPC4_WD40 Beta-prop_TEP1_C HC2 Beta-prop_VPS8 Beta-prop_RIG_2nd DSE1_N Beta-prop_WDR3_2nd
Other DBs
NCBI-GeneID: 121548892
NCBI-ProteinID: XP_045066097
LinkDB
Position
33
AA seq 1048 aa
MPVTESCTVRLLRLPLTKKRCSVKLSRLSVIKKRCSVRLSRLLLTDKWCSVRLCRLPVTK
KSCSVKLSSLPVTQKRCSVRLSRLLMATIAQKLGKQGSESMGVPHGEETEEQTDPHEKPR
AEAQTNPHEKPQDTNGEAVGATSEQGQELPPEELPVTSSTPGNRLQRKRVPNPKYQSEPD
TDMTNTDLQCPDSTEKPRKKRGLKKSVSNTETDQQEPAKKTPKPKTPKKTPAKKTPQKKA
AVSSINSEKGLIKQTPAKKTSAKKIQQETPQVNSTPPPAVPELRETPEEPETTPGGRPKR
RAAKAALQYLHTLAKEVYNQSDNATKNDWESSPVPSPSSTQPQKRTRGKGKKRKAPDFDS
DNAAEDMDFVPENKDTEEEREDEDTQEDLDLDLEQRHTPTKDLRSRRISRGLSSQARYHG
NAPNGLTNIVMGPIWMCTKTTKTFRDEHCNEWVFAEWIPSEKDWHCLSDSEAEQYLPQEM
MSTAFSFSREGIREETPLHRMKRFECLPPHPERWDMLFYTGGPVWAMDWCPTPDGAPASQ
CAAIYCHRNLDDQHRMNELYTKPGLIQIWDMGQLQYNTSPQSSPRLAYGIAQDKGFVWNL
KWCPGGAWELPTTNRKAPHMPRMGLLAASTSDGHITIYSLPHPDTLLARRKHTAKGGASP
TLMICQVQGVITLKRGSFKTNHDEKNNQVLSMDWLPVKPHNILAAGFYDGTVALWDLSSK
SILQRVRAPDRSFTLYPYHCFIAHDNATRALSFCHASRDLMVTAGDDRLVKMWDLRRTWE
PCQSFKRFLSTEAAWPLHWAGVFISQESAYATFGQHGLNYFDSGYLGFKPLFLVPRKGTM
WSLSISDWLNTAVTADTVGDVIMVLLPNLFNNPCYLKRSIDRRFPVFRTEMVQLKEGVEE
NEGGLGEEGSGSTSNGTSHHIPQTYRETANKYYLHYHDMDMRTFKNVQNRAPWKHMQAAE
AKGGLGLDLMPLASLTKIRFNPNLCAQSWVLSGGQAGLVRAHCLRAMNSSHINKMVQESQ
AQFSTMFTQDTTDSQGDASAVRHTTEKL
NT seq 3147 nt   +upstreamnt  +downstreamnt
atgcctgtgacagagagttgcacagttaggctgttaaggctgcctctcaccaagaagaga
tgctcagtaaagttgtctaggctttctgtgataaagaagaggtgctcagtaaggctgtca
aggcttcttttgactgataagtggtgctcagtaaggttgtgtaggctacctgtgacaaag
aagagttgctcagtaaagttatctagtctgcctgtgacgcagaagcgttgctcagtaagg
ttgtctaggctgttgatggcaaccattgcccagaagttgggcaaacagggtagcgagtcc
atgggcgtaccccatggagaggagacagaggagcagactgatccacacgaaaagcctcgg
gcagaggcgcagaccaatccacatgaaaaacctcaggacacaaatggggaggctgttggt
gctacatctgaacaaggccaggagctgcctccagaagagcttcctgtaacatcctccacc
ccgggaaatcgtctgcagagaaaaagagtccctaatccgaaatatcagagcgaaccagac
accgacatgaccaacacagacctacaatgtcctgactcaacagaaaagccaaggaaaaag
aggggcctgaaaaaatctgtctccaacacagaaactgaccagcaggagcctgccaaaaag
accccaaaaccgaaaacccccaaaaagacacctgccaaaaagacaccacagaaaaaggca
gcggtctcgagcataaacagtgaaaaggggcttatcaaacagacccctgccaagaagacc
tctgccaagaaaatacaacaggaaacaccacaggtcaactccacgcccccccctgcagtc
ccggaactgagggagaccccagaggagcctgaaaccacccctggtggcagacccaagcgg
agggcagcaaaagctgcattgcagtacctccataccctggccaaggaggtatacaaccaa
tctgacaatgctactaagaacgactgggagtctagcccagtccccagccccagctcaacc
cagccccagaaacggaccagaggcaagggcaagaagaggaaggcccctgattttgacagt
gacaacgccgcagaggatatggactttgttccagaaaataaagacactgaggaggaacgt
gaggatgaagatactcaagaagacctagacttagacttggagcagaggcacacaccaacg
aaagaccttagatccagacgcatttccagaggtctttcaagtcaagctcgatatcatggt
aacgcccccaatggactgaccaacatcgtgatgggacccatctggatgtgcaccaaaacc
accaagaccttccgtgatgaacactgtaacgaatgggtctttgctgagtggataccttca
gagaaggattggcattgcttgtcggacagtgaggctgagcagtatctaccgcaggagatg
atgtctacagccttcagcttctccagagagggcatcagagaggagactcctctgcacaga
atgaagaggtttgagtgcctgccacctcatcctgagcgctgggacatgctattctatacg
ggcggcccggtgtgggccatggactggtgccccacccccgatggcgcccctgccagccag
tgcgctgccatctactgccacaggaacctggatgaccagcacaggatgaatgagttgtac
accaaacctggactcatccagatctgggatatgggacaactccagtacaacaccagtccc
cagtcctctccacggctggcctatggtattgcccaggataaaggctttgtgtggaacctg
aagtggtgtccaggaggagcctgggagctgcccaccactaacaggaaggcccctcacatg
cccagaatgggtctcctggctgcctccacatcagatggtcacatcaccatctacagcctg
cctcaccccgacacactactagcccgcaggaaacacaccgctaaaggtggagccagccca
acgctgatgatctgccaggtacagggtgtgatcactctgaagcggggctccttcaagaca
aaccacgatgaaaagaataaccaggtcctctccatggactggctgcctgtcaaacctcac
aacatcctggctgctggcttctatgatggtacggtggccctgtgggacctgtccagtaag
tctattctgcagcgggtgcgtgctccagaccgctccttcaccctctacccctaccactgc
ttcatcgcccacgacaatgccacccgtgccctcagcttctgccacgcatccagagacctc
atggtgacggcgggtgatgacaggttggtgaaaatgtgggacctgaggaggacctgggag
ccctgccagtccttcaagcgcttcctctccaccgaggcagcctggcccctgcattgggct
ggtgtcttcatctctcaggagagcgcctacgccacgtttggccaacatggactcaattac
tttgactcagggtatctgggcttcaagccactctttctggtgccacggaaagggaccatg
tggagcctgtctatctctgattggctgaacacggctgtaacggcagacacagtgggagat
gtgatcatggtcctactacccaacctgttcaacaacccctgctacctcaaacgatccatc
gatcgcagattcccggtgttcagaaccgaaatggtccaattgaaagaaggagttgaggag
aatgagggtggacttggagaggaaggaagtggttccactagtaatggaacgtcccatcat
atacctcagacctacagagagacagccaataagtactacctccactaccacgacatggac
atgagaacgtttaagaatgtccagaaccgagctccttggaagcacatgcaggctgcagag
gccaaagggggactgggtctggacctaatgcctttggcttcactaactaagatccgtttc
aaccccaacctgtgtgcccagagctgggtgttgtctgggggccaggcgggcctggtaaga
gcccactgcctcagggccatgaacagctctcacattaacaagatggtgcaggagagccag
gcccagttcagcaccatgttcacccaggacaccacagacagccagggggacgccagtgcc
gtcagacacaccacagaaaagctatag

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