Coregonus clupeaformis (lake whitefish): 121548906
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Entry
121548906 CDS
T08357
Name
(RefSeq) EH domain-containing protein 3 isoform X1
KO
K12476
EH domain-containing protein 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121548906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121548906
Membrane trafficking [BR:
cclu04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
121548906
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Gene cluster
GFIT
Motif
Pfam:
DUF5600
EH
EHD_N
Dynamin_N
MMR_HSR1
EF-hand_1
Gtr1_RagA
GTP_EFTU
AAA_16
EF-hand_7
AIG1
AAA_22
CpxA_peri
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
121548906
NCBI-ProteinID:
XP_041716494
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All DBs
Position
33:complement(25551754..25582406)
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AA seq
536 aa
AA seq
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MFSWLGTDDRRKKDPEVFQTVSDGLKKLYKTKLLPLEEHYKFHEFHSPALEDADFDNKPM
VLLVGQYSTGKTSFIRYLLEQDFPGMRIGPEPTTDSFIAVMHGDTEGVIPGNALVVDPKK
PFRKLNAFGNAFLNRFVCAQLPNPVLESISVIDTPGILSGEKQRISRGYDFAAVLEWFAE
RVDRIILLFDAHKLDISDEFSEVIKALKNHEDKIRVVLNKADQIETQQLMRVYGALMWSL
GKIVNTPEVIRVYIGSFWSHPLLIPDNRKLFEAEEQDLFKDIQSLPRNAALRKLNDLIKR
ARLAKVHAYIISSLKKEMPSVFGKEGKKKELINSLGEIYSRIEREHQISPGDFPNLKKMQ
EQLNAHDLNKFQPLKMKLLDTVDDMLAHDIASLMVLVRQEETNRPQQVVKGGAFDGTLNG
PFGHGYGEGAGEGIDEAEWVVARDKPMYDEIFYTLSPVNGKVTGANAKKEMVKSKLPNTV
LGKIWKLADIDKDGMLDDEEFALANHLIKVKLEGHELPADLPGHLIPPSKRKIPTE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctggttgggtaccgatgacaggaggaagaaggatcctgaggtctttcagaca
gtcagcgatggcctcaagaagctctacaaaaccaagctgttacccttggaagaacactac
aaattccacgagttccactcgcccgccttagaggatgccgactttgacaacaagcccatg
gttctccttgtggggcagtattccactggaaagaccagcttcatacgatacctgttggag
caggatttccctggaatgcggatcgggccggagcccaccacagactccttcattgcagtg
atgcatggagacacggagggggtgatccctggcaacgccctagttgtcgaccccaagaaa
cccttcaggaagctcaacgccttcggaaacgcctttctcaacaggtttgtgtgtgcccag
ctgccaaaccctgttctggagagcatcagtgtgatagatactcctggtatcctatctgga
gagaagcagaggatcagcagaggctacgatttcgcagccgttttagagtggtttgccgaa
cgtgtggaccgcatcatcctcctgtttgacgcccacaagctagacatctcagacgagttc
tcggaggtcatcaaggccctgaagaaccacgaagacaagatccgggtggttctaaacaag
gctgaccagatcgagacgcagcagctgatgagggtttatggcgccctcatgtggtcgctg
gggaagatcgtcaacacgcccgaggtcatccgtgtctatatcgggtcgttctggtcgcac
ccactgctcatccctgacaaccgtaaactgtttgaggcagaggagcaggacctgttcaag
gacatccagtcactgccccgcaacgctgccctcaggaagctcaatgacctcatcaaaagg
gcacggctcgccaaggtccatgcctacatcatcagctctctgaagaaggagatgccaagt
gtgtttggaaaggagggcaagaagaaggagctgatcaacagcctgggagagatctacagc
cgcatcgagagagaacaccagatctcccctggagacttccccaacctcaagaagatgcag
gagcaactgaatgcccatgatctgaacaagttccagcccctgaagatgaagctgctggac
acagtggatgacatgctagcccatgacatcgccagcctcatggtgctggtcaggcaggag
gagaccaaccgaccccagcaggtggtgaagggaggggcctttgacggcaccctcaacggg
ccctttggccatggctacggcgagggtgccggggagggcatcgatgaggcagagtgggtg
gtggcccgcgacaagccaatgtacgacgagatcttctacacactgtcgccggtcaatggg
aaagtgacgggcgccaacgccaagaaggagatggtgaagtccaagctgcccaacactgtg
ctggggaagatttggaagctggctgacatcgataaggatgggatgctggatgatgaggag
tttgccctggccaatcacctgatcaaagtcaaactggaggggcacgaactgcccgccgac
ctccccggtcacctcatccccccctccaagaggaaaatccctactgagtag
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