Coregonus clupeaformis (lake whitefish): 121548915
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Entry
121548915 CDS
T08357
Symbol
vta1
Name
(RefSeq) vacuolar protein sorting-associated protein VTA1 homolog isoform X1
KO
K12199
vacuolar protein sorting-associated protein VTA1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121548915 (vta1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121548915 (vta1)
Membrane trafficking [BR:
cclu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
121548915 (vta1)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vta1
Vta1_C
AATF-Che1
Motif
Other DBs
NCBI-GeneID:
121548915
NCBI-ProteinID:
XP_041716515
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All DBs
Position
33:complement(26201367..26271482)
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AA seq
326 aa
AA seq
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MALPPQLKAIQHYLRTAQELEKRDPVVAYYCRLYAMQTGMKLDSKTPECRKFLVKLMDQL
ETMKKELTDNDSITHEVVGNAHIENYALKMFLYADNEDRSGRFHKNMIKSFYTSSLLLDV
LSVFGELSEENIQHRKYARWKATYIHNCLKSGETPQAGPAGYEEETYDEEYGAEGGGGPS
SQSAQPQSPPHSQPGFRDPNQVPGSMGGPPYPQEPGSIGGPPYPPTNYNNIHIPPGAHCP
ANTPAELPPPAAGEPIKPVPVPRSIPAVDPSLRSATQEGDVRLTPEDYTRAQKYCKYAGS
ALQYEDVGTAVQNLQKALKLLTTGKE
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggctctcccaccacagctaaaagccattcaacactatctaagaactgcacaggaactt
gagaagagggatcctgtcgtggcttactactgtcggctttatgccatgcagacgggaatg
aaactggacagcaaaaccccagaatgccggaagtttcttgtgaaactgatggaccagtta
gaaacgatgaagaaggagctgactgacaatgactcaatcacccatgaagttgtcggcaat
gcacacatcgaaaactatgccttaaaaatgttcctctatgctgacaacgaggatcgttca
ggaagattccacaagaatatgattaagtccttctacacatctagccttttgttagatgtc
ctgtcagttttcggcgagttatcggaggagaacatccagcacaggaagtatgcgagatgg
aaggccacctacatccacaactgtctgaaaagtggtgaaaccccacaggctggccctgct
ggctatgaagaggaaacatatgatgaggaatatggtgctgagggtggagggggaccctcc
tctcagtctgctcagccccagtctccaccccattcccagcccggcttcagggatccaaac
caggtgcctgggtccatggggggtcccccctacccccaggaaccgggctccattgggggt
cccccctacccacccaccaactacaacaatatccacatcccccctggagcccactgccca
gccaacacacctgcagagctccctccacctgcagcaggagaacccattaaaccagtgcct
gttccccgaagcattccggcggtcgacccctcactgcggagtgccactcaggaaggtgac
gtgcgcctcacaccagaggactacaccagggctcagaagtactgcaagtacgccggcagc
gccctgcagtacgaagacgtgggcacggcggtgcagaatctgcagaaggccctgaagttg
cttaccactggcaaagaatga
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